Scomber japonicus (chub mackerel): 128360191
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Entry
128360191 CDS
T09718
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128360191
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Other
128360191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
128360191
NCBI-ProteinID:
XP_053176536
LinkDB
All DBs
Position
6:complement(27486139..27577047)
Genome browser
AA seq
2098 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSPRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
HSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFIVSWYRNTESVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCTAKGAPPPTITWTLDDEPVARDLSRVRASQYTLSDGSTVSHVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKGTLAGIGNPQQYHTVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNSIGKSEASKELTISTEEAQPDGPPMEVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTTKEQVELRGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPMPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNYSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVTLEFRPKGTWTWQNVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSAKQQALTMGHAGLSNLTSSGASSG
GATGGCGGGSGSGVASASSSSSTLPQRTLTMPGSSASVAQSAAAAAAATAAAASGASSSS
GGCGAVGATGGTPGGASSSSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctccgcggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggccgccggagacgacatttacgacgtgccccatatccgccacgtgcatgccaacggc
accctccagctctacccattctctccctccgcctataacagcattatccacgacaacgag
tacttctgcactgctgagaaccaggcaggaaagattcgaagccccagcatccacatcaaa
gcagtgttcagggagccctacacagttcgtgtggccgaccagcgctccatgcggggtaat
gtcgccgttttcaagtgcctcatcccctcagccgtccaggagtacgtcagtgttgtgtcc
tgggagaaagacaccgtctccatcgtcccaggtaaccgtttcttcctgacctcatttggc
gctctgtatatctcagaagtgcagaaggaagatgctctgtccacctaccgctgcattaca
aagcacaagtacagtggagagacgcgccagagcaatggagccaggctctctgttatggac
cctacggagtccaccccgtcagtgctggacagtttccagtccggtgaggtgcaggttggg
cacagtgtggagctaccctgcatcgcatctggatatccaaaccccaccatccgttggcta
aaggatgggcggccattaccggcagattcccgctggacacgacgcatcaccggcctcaca
atttctgacctgaggcttgaggacagcggcaactatatctgtgaggtcaccaacagcttt
ggctccaaagaggtgacaggtcacctcaatgtcatagagccattgcgggtcacattgtcc
cccaagaacctgaagacggggatcagcagtactgtcatcctgtcttgtgccgtccagggt
tccccccattttattgtgtcttggtaccgtaacacagaatctgtcctgcctgatcagcac
ttctccatccagggggctcacaatgagacattgtttatttctgctgcacaaaagagacac
tctggagcttaccagtgctttgccacacgcaaaggccagactgcccaggacttctccatc
atattgctggaagatggtacgccccgtatcgttgcctccttcagtgagagggtcgtggtt
ccaggtgaaccattctccctgatgtgcaccgccaaaggagcgcctcccccgaccatcacc
tggaccctggacgatgagccggtggcccgagacctgtcgcgtgtccgagccagccagtac
acactctccgatggcagcacagtgagccacgtcaacgtcagcagtccacagattcgcgac
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtccaccgaggattcggccgatgaagaacattactgcagtggcagga
agaaacacgttcataaactgccgtgttattgggtacccttattattcaatcaactggtac
aaggaagggctcctgttgcctgacaaccatcgccaggtggtgtatgagaacgggactctg
aagctcagtgatgttcagaaggggatggacgaaggggcctatgtctgcagcgtactcatc
caaccgcagctgttcatcacacagacagtttatgtcactgtcaaagttcctccactgatc
cagccatttgactttccaccgacttccatcggtaaattgatgtacattgcttgtgtggtg
tcatctggagacatgcccattcgcattacgtggcgcaaggatggccaggagattgtgcct
tcctcgggcatcaccatcgacacaaaggagttcatgagctccctccagatatccaaggtg
tcactcaaacacaacggcaactacacgtgtatcgccagcaatgatgctgccactgtaagc
actgagaggcagctcactgtaacagtgcctcctcggtttgtggtgcagcccaacaaccag
gatgggatctatgggaaggcagggatcctcaattgttcagtagatggataccctcctccc
aaggtcatgtggaagcatgccaaaggtacactagcgggtattgggaacccacagcagtac
cacactgtgcctctgacgggccgtatccaaatcatgaataacggttctctactcatcaga
catgttctggaagaggatcgtggcttctacctctgtcaggcctccaatggggttggctca
gacatcagcaagagcatggttctcactgttaagatcccggcaatgatcaccagtcacccc
aacactaccatggctaagaagggtcacgtgaaggagctgaactgcacagccaggggagaa
tggcccatcatcatccgctgggagagaggcgacactgtcattgaccctgaccgcaaccct
cggtactcaattaccaccagtcccaatgagaagaccgacgaggttttgtcgacactcaag
ctaaagccagcagagcgtgaggattcagtcttcttctcctgtcatgctatcaactcttac
ggagaaggacgaggccttatacagctcactgtgcaggagcccccagaccctccagagcta
gaggtgcgagaagtgaaagatcgtagtatgaacctccggtggacacagaggtttgatgga
aatagtgtcattacctcctacgatatagagtataagaacaagacagattcatgggagctg
aagcatgccactcgtaatatttcccccaccaacaatcaggcgaacatagtggaccttcac
cctgcctctgtctacagcatccgcatgtactcctacaactctataggcaagagcgaggcc
agtaaagaactcaccattagcacagaggaagctcagcctgatggtcctcccatggaggtg
atcctgcagccagtaacctctcagagtatcagagtcacctggaaggctcccaggaaggag
ttgcaaaatggggtgatccggggttaccagatcggttacagagagaatggtccgggtagc
aacggtcagtacagcattgtggagatgaaggccacaggagacagtgaggtgtacacactg
gacaacctgaagaagtttgctcagtatggtgtggttgtccaggccttcaacagagccggc
actgggccttctagctcagagatcaacgctacaacactagaagatgtgcccagccagccc
cctcagaacgtgcgagccatttctgtaacatctgacgaggccgtaatcacatgggctgaa
cctcccaggatgacactgcatggtgtcttgaagggataccgtgtcgtgttttgggctgtc
tttccagatggagagtggggtgaaatgcaaaatatcaccactaccaaggagcaagtggag
ctcagaggcctggagaagtttaccaactacagcatccaggtgctggcctacacccaggct
ggtgatggagtccggagcaatgtcctttatatccagacccgcgaagactaccctggaccc
ccagctggcatcaaagctgtgccctcctccgccagtagtgttgtggtgtcctggttaccc
ccccacaagccaaatggaatcatccgcaaatacaccatctactgctccagccccgggtca
ggccaaccgatgccaagcgagtatgaagccaatccagagctactattctacagaatcacc
caccttaaccacaggcagcagtacctgatctgggctgcagccgtcaccactgcaggccgg
ggtaactacagcgacaaagtcactgtggagccagcagccaaggccccagctaagatccta
tcatttgggggtacagtgactactccctggatgaaggaggtgcgactgccctgtagctca
gtaggagaaccaacacctaccataaaatggaccaaagacagtgaggacacagccatccca
gtgtctcttgacggacagcgtctcattcttgcaaatggcacgctggtgctgcgctctgtc
aaagctgaagattctggttactacacctgcacagccaccaacacgctaggctttgacact
atcatagtcaaccttttggtacaagtccctccagaccagcctcgtcttactgtctccacc
acctccacctcctccatcactctagcctggataccaggagacaacggaggcagctctatc
agaggttttgtgctgcagtactctgttgacaacacagaggagtggaaggatgtgttcatc
agttctagtgagcgctcctttaaactggataatctgcgctgtggcacctggtataaagtc
aagctggctgccaaaaacagtgttggagccggacgcatcagtgagatcattgaggcaaag
actcacggacgagagccccagttcaacaaggatcagccagtcttcacccacatcaactcc
agtcacgcccgcctcaacctgcagggttgggccagtggaggttgtccaatcagcgctgtc
acactagagtttagaccaaagggtacatggacgtggcagaatgtgcgtaccaatgccacc
acagatgttttcctggcagagctgcgtgaggccacctggtatgaactgaagatgaaagcc
tgtaacagtgctggctgtggtaaccagagctcccagtttgcaacactggattatgatggc
agcacaatccctccaatcaaatctcccctggaaaagaatgatgatgtcaagaagctgttt
tcgatcggctgtcctgtgatcttggtcactcttggtgttgcactcctcttcatcattcgc
aagaaacgcaaagaaaagaggctaaaaagactaagagatgccaaaagcctggcagagatg
ttgatcagtaaaaacaaccgcagctttgacaccccagtgaagggacctcctcagggccca
cggttacacatcgacatccccagagtgcagctgctaattgaagacaaagagggcatcaag
caaatcggtgaggacaaagccaccatccctgtgacagacacagagttcaatcaaactggg
aatcctcagagcttctgcacaggtgtgtctgtccatcaccccgctctcatccagaacacc
ggtcctttgattgacatgtcagacatcaggccaggaaccaacccagtgtcaaggaagagt
gttaaatcggcccacagcatcaggaatcgctactccagtcagtggactctaaccaagtgt
caagcctccacgccagctcgcactctcacctcagactggcgcacagttggctcccagcat
ggcatcactgtcacagagagtgacagctacagcgccagcctctcacaggacacagataag
ggtcgcaacagcatggtatcgacagagagcgcctcatccacctacgaggagttggcaaga
gcatatgagcatgccaagctggaggaacacctgcagcatgccaagtttgagattacagag
tgctttatctctgacagctcatctgaccagatgaccacaggtaccaatgacaatgcagac
agcatgacgtccatgagcacaccgtcagagcctggtatctgccgtttcactgcctcgcca
cccaaaccccaagactacgatcgtggcaagaatgtagccgtgcccattccacaccgcgcc
aagagtgactactgcaacctacccctctacatgaagtcagatcccttcttccgaaagcag
tcggagcatcatgacccatgtccagtggttccaccacgtgaagcctctattcgtggcctg
gcccagcgggcataccacacccagggccgtcatgtgactatggactctgcaaagcagcag
gccctaaccatgggccacgctggtctgtccaacctcacttcctctggggcttcctctgga
ggagcaacaggaggttgtggtggaggtagtgggagtggagtggcgtctgctagctctagc
agctccacacttccccagaggactctcaccatgcctggctcctctgcctcagtggcccaa
agtgcagcggcagctgctgctgctactgctgctgcagcttctggggcatcatcatcctcc
ggtggatgtggggcagtaggggccacaggagggacccctggaggtgcctcctcatcctcc
aagatgggaggatccagagactctctccttgagagcagctcctcgggcttaggcagacta
cagaagcagagggatggaggggcaggagcctactccaagtcctacacactggtgtag
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integrated database retrieval system
