Scomber japonicus (chub mackerel): 128360200
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Entry
128360200 CDS
T09718
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128360200 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128360200 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128360200 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128360200 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128360200 (si:ch211-11n16.2)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Others
128360200 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
128360200 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
MqsA_antitoxin
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128360200
NCBI-ProteinID:
XP_053176548
LinkDB
All DBs
Position
6:complement(10214487..10222637)
Genome browser
AA seq
655 aa
AA seq
DB search
MSEILMKEMENILISPMKPEARAGGVQSFLLVDEQENLQVRDESQFLDRLCCGDVAGVKV
LSIFGNTGDGKSHTLNHILFGGETVFYTSKSPSSCTVGVWAAYDPNLSLLALDTEGLLGA
AANQNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFQFLSSASGAYLKHFTPELRALSTRC
GLDVPLSCLGPAVIVFQETTHTQLLGHDSKVAGHADTQLQKRFHDLGLGTEAFSSMQYVG
TQTITPPTDYNCLLEAVKQQVKNTHTRSPRQPGIVFHALEALSERFCGELSDDKMTLYSF
FPDEYFTCSAVCLSCNIRCKNGMNHLKDRVPHMADGLCQYAHQFNNKVLICKRCYEGGRE
MIVVPKTSASSDNPWFGLAKYAWSGYVLECSSCGVIYRSRQYWMGNQDPESGVVRSEVKH
VWEGSDTFLTNHQNAAQRVLDGMNCVIQSVSEYSTGPTKAVTAWLTDQVAPPYWRPNTDI
TACHGCQKVFEEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSSPVRVCKACYRQGGPT
DTNSQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPICFVKDVARPDYWVPDQDITQCY
QCSKTFTPIMSKHHCRACGQGVCGPCSTHLKPVPSRGWDHPVRVCDSCHARTDSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatcctaatgaaggaaatggagaatatactgatcagtccaatgaagccagag
gcgcgtgcgggcggtgtgcagagcttcctgctggttgacgaacaagaaaacctgcaggtc
cgcgatgagtctcagtttctggacaggctctgctgtggggacgtggcaggcgtcaaagtc
ctctccatctttgggaacacaggcgacggcaagtcccacaccctcaatcacattctgttt
ggtggcgagaccgtgttttatacctccaagtcccccagttcctgcacagtgggtgtgtgg
gccgcctacgaccccaacctcagccttctcgccctggataccgagggcctgctgggggcc
gcggccaatcaaaaccagagaatgcgtctgctgctgaaggtgttggcagtgtctgatatt
gtagtctatcgtacacgagctgagcgcctccacaacgatatgttccagttcctgagcagt
gcctcaggggcctacctgaagcacttcacccctgaactgagagccctgtccacccgctgc
ggtctggacgtgcccctgtcatgtcttgggcctgctgtcattgtcttccaggagacaacg
cacacccagttgctgggtcacgactctaaggtggccggccatgctgacacgcagctccag
aaacgttttcacgacctgggtttggggaccgaggccttcagctcaatgcagtatgtaggc
actcagaccatcacacctcccaccgactacaactgtctactggaggctgtcaagcagcaa
gtaaagaacactcacacacgctccccccgccagcctgggatagtgtttcatgcactggaa
gccctaagtgagcgtttctgtggggaactgtcagatgacaagatgactctgtactccttc
ttcccagatgagtactttacctgctccgctgtttgcctcagctgcaacattcgctgtaaa
aatggaatgaaccatctgaaagaccgagtcccccatatggcagatggcctgtgccagtat
gcacaccagttcaacaacaaggtcctcatctgtaagaggtgctatgaaggaggcagagag
atgattgttgtgcccaagacttcagcttcctctgacaacccgtggtttggactggccaaa
tatgcctggtcaggttatgtgttggagtgttccagctgtggtgtaatctaccgcagcaga
cagtactggatgggaaaccaggacccagagagtggcgtggtgcgatctgaggtcaagcac
gtctgggaggggtcggacaccttcctgaccaaccaccaaaacgccgcccagagggtcctg
gatgggatgaactgtgtgatccagtcagtgtcagagtacagcactggccccaccaaagcg
gtcactgcctggctcactgaccaggtggcgccgccatactggagacccaacacagacatc
actgcctgtcatggttgtcagaaggtgttcgaggaggcagagaggaagcaccactgccgt
tcatgcggtgaaggtttctgccatccctgctccagccacaggatgcccgtgccagagagg
ggctggggcagcagccctgtcagggtgtgtaaggcctgctaccgccagggagggccaacc
gataccaacagccaggtgtgtaaggtggagcctcgtggtctaatagctcgcagggtgacg
gaggtggctcagtctacgctggacatggtcaccacagctgtggactaccctatctgtttt
gtgaaggatgtggctcgaccagactactgggtgccagatcaggatatcacacagtgctac
cagtgctccaaaacctttaccccaataatgtccaagcaccactgcagggcctgcggacag
ggtgtgtgcggtccctgctctacacacctcaagccagtaccctcccgaggctgggatcac
ccggtcagagtatgcgacagctgccacgcccgcacggatagcctgtaa
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