Scomber japonicus (chub mackerel): 128360280
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Entry
128360280 CDS
T09718
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128360280 (smc4)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
128360280 (smc4)
Condensin II
128360280 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
TPR_MLP1_2
AAA_29
CCDC113_CCDC96_CC
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
128360280
NCBI-ProteinID:
XP_053176656
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All DBs
Position
6:26027377..26046462
Genome browser
AA seq
1299 aa
AA seq
DB search
MPSKTAKRSTASAKPRGKGSQPRNDSEDKLDVPPQETNSNGQEEAPPTTDPSHGEAAEAL
DNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYKAQKIRSKRLSVLIHNSDQHKDVQSCTVEVHFQKIIDKEGD
DYEVIPSSNFYVSRTANKDNSSAYYINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYMEDIIGCCRLKEPIQTLARRIELLNEQRGEKFNRVKLVEK
EKNALEGEKNKAVEFLTLENNIFKHKSQLCQYYVHDLQKRVVDKEQEKQRILEDNKELTE
KNTEISQEMEKKNEEVKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHCKSKNKK
LQKQLEKDKEKLEEVRSIPANSEKAISEATASKEGLEKQKVKEEEKLKEVMESLKEETSG
LQQDKETKEKELMELSKAVNETRSRMDLAQSELDIYLSHHTTAVTQLNTAKQTLQTTSDT
LRERRAAIKDLDVNVPQKEQELKKDEEEMEQLMKMDNENRVVVTEMRQKVEEAKSSLSSN
RSRGKVLDALMQQNKSGRIPGIFGRLGDLGAIDEKYDVAISSSCGALDNIVVDTIDTAQK
CVMFLKEQNIGFATFIGLDKMKVWEKNINTPIRTPEDSPRLFDMVRVKDESVRPAFYFAL
RDTLVAKDMEQATRLAFQKDKRWRVVTLKGQIIEMSGTMTGGGRIMKGRMGSSIGTEVSQ
KEIDQMESQLNEKVSKLQDCREKRLQLEEKVQSCRPQLRDMKNTLEKYSKSMTGLADQET
HLTLQIKELEANVLAAAPNKTKQKQMEKSLEAFKKDFEAASSKAGKVENEVKRLHNLIVD
INSHKLKAQQDKLDKVNKELDDCSSTITKAQVAIKTAGRNLKKCEESVSRVQGEQEENEK
SLAEFGEQLKKLEEEAGEIMKACQEAEAALPEVQEQYQRVLKEIKVLQQQEHALQQECLS
VRLRIEQIETTITEHNSKIKNWQKEATKLSLHTIEDQPAEELPVFTPDELDQISDPNVIV
NKMVTLETRCAQKKPNLGAIAEYKKKEELYLQRVAQLDEITKERDNFKSGYQDLRKQRLN
EFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSG
GEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVSYYIYEQTKNAQFIIISLRD
NMFEIADRLIGIYKTYNTTKSVAINPKTIVSKEQTAITV
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgctaagagatccactgcctccgccaagccaagagggaaagggtcg
cagcctcgcaatgactccgaagacaagctggatgtaccccctcaagaaaccaactccaat
ggccaagaggaggcaccgccgacaactgatccgtctcacggggaagctgccgaggcgctt
gataatcgaagtttggaggagattctcggtagcatccctccacccccgcccccagcaatg
accaatgaaccgggcgctcctcgcctgatgataacacatttagttaatcgcaacttcaaa
tcttacgcaggcgagcagattctggggccttttcataagcgcttttcctgcatcattggt
ccaaatgggagtgggaagtccaatgtgatagattcaatgctctttgtgtttggatacaaa
gctcaaaagatcagatcgaaaaggctctcagtgctgattcataactctgatcaacacaaa
gatgtgcaaagctgtactgtggaggtgcactttcaaaagatcattgataaggaaggagat
gactacgaagtcatccccagcagcaacttctatgtttccaggactgccaacaaagacaat
tcctcagcctactatatcaatggcaagaaagccacattcaaagaagtgggggctttactc
cgaagtcatggtattgacctagaccacaacagatttctgatcttacagggtgaggtggag
caaattgccatgatgaagcctaaaggtcagacagagcatgatgagggtatgctggagtac
atggaggacattatcggttgctgccgtctcaaggagcccatccaaaccctggcccgccgc
attgaactgctcaatgagcaaagaggagagaagttcaaccgagtaaagcttgtggaaaaa
gagaagaatgctttggagggagaaaagaacaaagctgtggagttcctcaccctggagaat
aacatcttcaaacacaagagtcagctttgccaatattatgttcacgatctgcaaaagcgt
gtggtggacaaagagcaggaaaagcagaggatcctcgaggacaacaaggaactcactgag
aaaaatacagaaatatcacaggagatggagaaaaagaacgaagaagtcaaaaatgtggag
aagaaacaaaataagctcaacaagtacattgagactcagaaggagaagttcactcagctg
gacctacaggatgttgaagtgcgtgagaagattaaacattgcaagagcaagaacaagaaa
ctgcagaagcagctggagaaggacaaagaaaagctggaggaagtgcgcagtataccagcc
aacagcgaaaaggccatctctgaggcaacagctagcaaggaaggtctggagaagcagaag
gtgaaagaagaggagaaactgaaggaggtgatggagagtctgaaagaagagaccagcggc
ttgcaacaggacaaagagaccaaagaaaaagagctgatggagctcagcaaggccgtgaat
gagacccgctctcgtatggacctggctcagtcagagctcgacatctatctaagccaccac
accaccgctgtgacacagctcaacacggccaagcaaacactccagacaacttctgacacg
ctgcgggagcgccgtgcagctattaaggacctagacgttaatgtaccacagaaagaacag
gagctcaagaaggatgaggaagagatggagcagctgatgaagatggataatgagaacagg
gtagtggtgacggaaatgaggcagaaagtggaggaagccaagagctctctgtcttccaat
cggagtcgaggaaaggtcctggatgctctcatgcagcagaataagagtggcagaatccct
ggcatctttggaagattgggagaccttggagccatagatgagaagtatgatgtagccatt
tcctccagctgtggtgctctggacaacattgtggtggataccatcgacacggctcagaaa
tgtgttatgtttctcaaagagcagaacattgggtttgctaccttcattggtcttgacaag
atgaaggtgtgggagaagaacatcaatacccctatccgcacccctgaggacagccctcgt
ctctttgacatggtgagagtgaaagatgagagcgtgcggccagctttctacttcgccctg
agggacaccctggtggcaaaggacatggagcaggccacaaggctggccttccagaaagac
aagcgctggagagtggtcaccctgaagggacagatcatcgagatgtctggaaccatgact
ggaggaggaagaataatgaagggcaggatgggttcctctattggcactgaagtctctcag
aaggagatcgaccaaatggagagccagctgaatgagaaggtgtcgaagctgcaggactgc
agagagaaaaggctgcagctcgaagagaaagtccagagctgccggccacagctccgagac
atgaagaacaccttggaaaaatactccaagagcatgactggtttagctgaccaagagact
cacttgacgctccagatcaaggaactggaagccaacgtgctggctgctgcgccaaacaag
accaaacagaaacagatggaaaagagcctggaggccttcaaaaaagacttcgaggcagca
tccagtaaagccggaaaggtggaaaacgaggtgaagagactccacaacctgatcgtggac
attaatagccacaagctaaaggctcaacaggacaagctagacaaggtcaacaaggagttg
gatgactgctcctccactataaccaaggctcaagttgccataaagactgcaggccgaaac
ctgaagaagtgtgaggagagtgtgagtcgtgtgcagggtgagcaggaggagaatgagaag
tctttggctgagttcggagaacagctgaaaaaactggaagaggaggccggggagatcatg
aaggcctgtcaggaggctgaggcagcacttcctgaggtgcaggagcagtaccagagggtg
ctgaaagagataaaggtcctgcagcagcaggagcacgcactgcagcaggagtgcctcagc
gttcgactccgcatcgagcagatagagaccaccatcactgaacacaacagcaagatcaaa
aactggcagaaagaggccaccaagctgtcccttcataccattgaggaccaaccagcggag
gagcttcctgttttcactcctgatgaacttgatcaaatctcagatccaaatgtcattgtc
aacaagatggtcacattagagacacggtgtgctcagaagaagcccaaccttggcgccatt
gcagagtacaagaagaaggaggaactgtacctgcagcgcgtggctcagctggacgagatc
accaaagagagggacaacttcaaaagcggctaccaggacctgcgcaaacaacgcctcaat
gagttcatgaccggattcaacatgatcacaaataagctgaaggaaaactaccagatgctt
acactagggggtgacgcagagctggagctcgtggacagtttggaccccttctctgaggga
atcatgttcagtgtgcgacctccaaagaagagctggaaaaagatttttaacctgtcagga
ggagagaagaccctcagctcgttggcgctggtgttcgctcttcaccactataagcccaca
ccgctctacttcatggatgagatcgatgctgctcttgatttcaagaatgtgtccattgtg
tcctattacatttatgagcaaaccaagaacgctcagttcatcatcatctctctgagggac
aacatgtttgagatcgctgatcgtctcatcggcatctacaaaacttacaacaccaccaag
agtgtggcaatcaaccccaagaccatcgtatccaaagagcaaactgccatcactgtttaa
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