Scomber japonicus (chub mackerel): 128360323
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Entry
128360323 CDS
T09718
Symbol
cux1b
Name
(RefSeq) cut-like homeobox 1b isoform X1
KO
K09313
homeobox protein cut-like
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128360323 (cux1b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
128360323 (cux1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
128360323
NCBI-ProteinID:
XP_053176703
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All DBs
Position
6:complement(26299996..26362569)
Genome browser
AA seq
1367 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQKELDATATQLANRQDESEQSRKKLIDLSREFKKNTPEDL
RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKKIIDVPDPVPVLELAQQLQLKLQRMH
DIETENTKLRETLEDYNKEFAEVKNQEVTIKALKEKIREYEQSLKNQAENLAQEKQLQLH
NDYAEKERKLQESQDSMSSRLEEAEHKAQSLQTALETTQAELFDLKTKYDEESTAKADEI
EMVMTDLERANQRAEAAQREAESLREQLSLSNQSQQLGSPTKADPDTEQAVEVASHSSLE
AELRAKERETAQLVEDVQRLQASLTKLRETTSSQITQLEQQLSSKTAVLKELEEKLQKQA
DYEEVKKELSILKSMEFGTSDSVQDSSKPLEVLLLERNRSLQSESAAQRISNTELSGTAG
QKGTEESTPKEETMPSDPSSSPPPPPPSLPSSSQLPLSRTYTDPLNTATTTTSSSETHPF
TPTGIGQDFYSPVFPLVGGKMALNSLIQRQLLQTFYSKALQESSGIPSGALLFTPFTPTL
SSIPTSTPGSGSAAIPLAASSPQPPPASPDMAPVNGSSTAGSAPSPSPSHSDATTGSVLD
GEDMDTAEIARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPF
HKMRQFLADEQNILALRSIQGRQRGNITARVRTPEAGSDEAIKSILEQAKRELQVQKADL
SHAQPSYTGLKGGGGGGCGGGGGSGSDEAIRSILEQARREMEAQQAALEPILKASSSSSS
LASLSHRDVLSSPLTAPLPPYNPLALSLKKPPSSLLSSPSSPSPILDFSSSVKREGRASS
GMDLSIDGALRLGRSSEGLGRSGSAGGVGYWREQWWSNMQTDPRRTISNQIGEENHNLED
SKEGILSDSLSRHKPWNKLNQRSREPYLRMQPWLNGDQGQNSHIQQAQNQAEGTPKTSAS
CSPAPESPLSSAEESVNGLTGDPLASQSSGLKTHSEDPSGGESQPGTPLPLPGHSGLSIQ
EMVAMSPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLK
GREPFVRMQLWLQDPHSVEKLMDMKRLEKKAYMKRRLSSLSDNHSVDAALIGQDYVQGSQ
SPGQQHLKKPRVVLGPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRS
RIRRELFIEEIQAAGGMGPGSEGGSPSLRGSKSGEGDSCDGTESEGTVETRQGLGIGLED
HRGACKDHDMEAESEAGGSNNSPAQIDCTTSGLAGPGSSCGQGGLGLFSLTEASSSSSAS
STNIPSSGPARNPRDNNLRKKKAANLNNIIHRLEKAASKEDPSEWEF
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcaggatcgatgtttcaatattggaagcgctttgacttacaacaacta
cagaaagaactagacgccaccgccacacagcttgccaacagacaggacgagagtgaacag
tccaggaagaaactaatcgacctgagccgcgagttcaagaagaacacaccagaggattta
cggaaacaggttgcccctttgctcaagagcttccaaggagagattgatgctttgagtaag
agaagtaaagaagcagaggccgccttcttgaacgtctacaagaaaataatcgatgtccca
gatcctgtacctgtgctcgagctggctcagcagctgcagctgaagctccagaggatgcac
gacattgagacagagaacaccaaacttcgagagacactggaggactacaacaaagagttt
gcagaggtcaagaaccaagaggtgaccattaaggccttgaaggagaagatccgtgagtac
gaacagtctctgaagaatcaagctgagaacctggcgcaagaaaagcagctccagctacac
aacgactatgcagagaaggagaggaaactccaggagagccaagactccatgtcctcaagg
ttggaagaggccgaacataaggcccagtcccttcagacagcacttgaaacaactcaggcc
gagctctttgatttgaagacaaagtatgacgaggagtccacagcgaaggccgatgagatt
gagatggtgatgacagacctggaaagagccaatcagcgagcagaagcagctcagagagag
gcggagtcgctcagagagcagctgtccttgagtaaccaatcccagcagctcggcagcccg
accaaggctgaccccgacacggaacaggctgtggaggtggcatcccactcaagtctggag
gcggagctcagggccaaagaaagggagaccgcacagctggtggaggacgtccagagactg
caggccagcctgaccaaactccgagagaccaccagctcccagatcacacagctggagcag
cagctcagcagcaagactgccgttctcaaggaactggaggaaaaactgcagaagcaagcg
gactatgaggaggtgaagaaggagttgagtatcctcaagtctatggagtttggaacttct
gactctgtgcaggattcatccaaacctctggaggtgctgctgctggagaggaaccgtagt
ctgcaatctgagagcgccgctcagcgtatctccaacactgagctcagcgggacagccggt
caaaaagggacagaagagtccacaccgaaggaggagaccatgcccagcgacccctcttct
tcaccccctcctccccctccctctcttccttcctcctcccagctccccctgtctcgcact
tatacggatcccctcaacactgccaccaccaccaccagcagcagcgaaacgcaccctttc
actcctacgggcattggacaggacttctactcccctgtgttccctctggtgggtggtaag
atggctttgaactccttgatccagcggcagctgctccagaccttctactccaaagccttg
caggagtcgtctggaatccccagtggggccctactgttcaccccgttcactccaaccctc
agctccatccctacctccacccctggctctgggtctgctgctatccctctggcagccagc
agcccacagccgcctccagccagcccagacatggctcccgttaatgggagtagcactgct
ggcagcgccccgtccccatcacccagccactctgatgctaccacaggaagcgttttggat
ggggaagacatggacacagcagagattgcccgacaggtgaaagagcaactgatcaagcac
aacattggtcagcgtgtgttcggccactatgtgctgggactgtcccagggttcggtcagc
gaaatcctggccagaccaaagccgtggaacaagctaaccatccgagggaaggagcctttc
cacaagatgaggcagttcctcgccgatgagcagaacatcctagcgctgcgcagcatccag
ggacggcaaagaggtaacattaccgcccgcgtccgcaccccagaggcaggttcagatgag
gctatcaaatccattctggagcaggccaaaagagagctgcaggtgcagaaagctgacttg
tcccacgctcaaccctcatatacaggattgaaaggagggggtggaggcggatgtgggggt
ggagggggcagcggatcagacgaggctatccgctccatcctagagcaagctaggagagag
atggaggcccaacaagctgcactggagcccatcctcaaagcttcgtcttcctcgtcctcc
ctagcatcactatctcacagggatgtcctgagctctccgctcaccgctcccctcccccct
tacaaccccctggcactctccctcaagaagcctccaagctccctcttgtcctccccctcc
tccccgtctccaatcctggacttcagctccagtgtgaagagagagggcagggcttcttca
gggatggacttgtcgattgacggggctctcaggctgggtcggagctctgaggggctgggc
cgctctggaagtgctggaggagtgggctactggagagagcagtggtggagcaacatgcag
acagacccccgcaggactatatccaaccagataggagaggagaaccacaacctggaggac
tccaaagagggaatattgagtgacagtctgtctcgacacaaaccgtggaacaagctgaac
cagaggagcagggagccatacctccgcatgcagccatggctcaatggagaccaggggcaa
aactcacacatccagcaagctcagaaccaagcagagggtactcccaagacatcagcaagc
tgcagccctgctccagagtcgcccctcagttcagctgaggagtctgtcaacggtctaaca
ggcgatccgctcgcttcacagtcctccggtctcaaaactcattctgaggatccctcaggt
ggggagtctcagcccggcaccccgctgcctctgcctggtcactcgggtctcagcatccag
gagatggttgcaatgtctcctgagcttgatacttacgccatcactaagaaggttaaggag
gtgctgactgataataaccttggtcagcgtttgtttggggagactatcctgggtctgact
cagggttctgtctcagacctgctggccaggcccaaaccctggcacaagctcagtctgaag
ggcagggagcccttcgtccgcatgcagctctggctccaagacccacacagtgtggagaaa
ctcatggacatgaaacgcttggagaagaaagcttacatgaagaggcggctgagctccttg
agtgataaccattctgtggacgcggctttaatcgggcaagattatgtccagggctcccag
agcccaggacagcagcatctgaagaagcccagggtggtgttgggccctgaggagaaggag
gccctgaaaagggcgtaccagcagaagccctatccctcccccaaaaccattgaggagcta
gcctcccagcttaacctgaagaccagtactgtcatcaactggttccataattataggtca
cgtatccggcgagagctcttcatagaggagatccaggcagctggagggatggggcctggc
agtgaggggggctccccttctctccgcgggtccaaatcaggagagggggacagctgtgat
gggacagaatctgagggcacagtggagacacgccagggactgggcatcggcctggaggat
cacagaggagcatgcaaagaccacgacatggaggctgagtctgaggcagggggctctaat
aactcccctgctcagatagactgcaccacctcaggcctagccgggccaggctccagctgt
ggacagggaggactggggctcttcagcctcacagaggcatcctccagtagctctgcctct
agtactaacatcccatcctctggcccagccagaaaccccagggacaacaatctgcgcaag
aagaaagcagccaatctcaataacatcatccacaggctggagaaggctgccagcaaagag
gatccctcagagtgggagttctag
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