Scomber japonicus (chub mackerel): 128360350
Help
Entry
128360350 CDS
T09718
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128360350 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128360350 (limk1a)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128360350 (limk1a)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
128360350 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
PDZ_2
RIO1
B2
PDZ_4
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
128360350
NCBI-ProteinID:
XP_053176739
LinkDB
All DBs
Position
6:29058753..29106640
Genome browser
AA seq
677 aa
AA seq
DB search
MRLMLLCCTWKDERMGEEEAGGSLPVCAGCKQRIYDEQYLQALNTDWHTVCFRCCECSAS
LSHWYYEKEGRLFCKKDYWAKFGELCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRAFI
GDGDTYALVERSKLYCGHCYYQTIVTPVSLPDSPCSPCSRIPHTVTLVSIPASAEGNNGH
RGRGFSVAIDQPLSPINGYSPEHGPTVRVSQVDEDCISPDVKNSIHVGDRILEINGTPIH
NVPLDEIDLLIQETSRLLQLTIEHDPHSQGQEGGSSGAEEQVDGPLSSPLSGGPSPILPI
TQPPNPDINSLRSRIITRSYSIDKSPGSSNAASPISQRKDINRSESLRVVSNRTHRIFRP
SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLDHPNV
LKFIGVLYKDKRLNFIAEYIKGGTLREIIKKMDSNYPWNQRVSFANDIAAGMSYLHSMNI
IHRDLNSHNCLVREDNTVVVADFGLARLMVDDKHEEKLPQGKLSGLKKPDRRKRYTVVGN
PYWMAPEMIHGKSYDERVDIFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVSGFLEHYYP
PDCPPAFFPIAAVCCDLDADKRPAFTKLEEWLQNLKMHLDIGLPMVSEVSQLQKTFWEDH
SIMHSENGLHVHPEQPE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgcacctggaaggacgaacgcatgggagaggaggaagct
ggaggaagcttgcccgtctgtgcgggatgcaaacagaggatctacgatgagcagtacctc
caggccctcaacactgactggcacaccgtctgcttcaggtgttgtgagtgcagtgcctcg
ctgtcccactggtattatgaaaaagagggacggctcttctgcaagaaggactactgggcc
aaattcggggagctgtgccatggctgcaacgatccgatcaccaccggccttatcatggtc
gcaggggaacagaaatatcacccagaatgcttcacctgcctgaactgcagggcattcatc
ggtgatggagacacatacgctctggtggagagatccaaactttactgtggtcactgttac
taccagaccattgtcaccccggtgtcgttgccggactcaccatgctcaccatgctcgcgt
atccctcacacggtcacgctggtgtcaatccccgcctctgccgagggaaacaacggacac
agaggtcggggtttctctgtcgccatcgaccagccactcagcccgatcaacggctacagc
cccgaacatggacccactgtcagagtctcccaagtggacgaagactgcatcagtccagat
gtgaaaaattcgatccatgttggagacaggatcctggaaatcaacgggactccaattcat
aacgtccctctggatgagatcgacctgctgatccaggagacgagccggctgctccaactc
accatcgagcacgaccctcacagtcagggtcaggagggaggctcctcaggggccgaagag
caggtggacggccccttgtcgtcccctctgtctgggggccctagccccatcctgcccatc
acccagcccccaaaccccgacataaacagcctgaggtcccgtatcatcacgcggagctac
agcattgataagtcaccaggctccagcaacgcagcgtcacccatctcacagaggaaggac
attaatcgctcagagtcgctccgcgttgtctcaaatcggacgcaccgcatcttccgcccc
tctgacctaatccacggagaggtgctggggaagggctgcttcggacaagcaatcaaggtg
acccatagggagacgggggaggtgatggtgatgaaggagttgattcgctttgatgacgag
acgcagaggacattcctgaaagaggtgaaggtcatgcgttgcctggatcaccccaacgtg
ctcaagttcattggtgtcctctacaaggacaaaagactcaacttcatcgcagagtacata
aagggtggcaccttgagggagatcatcaagaaaatggacagcaactacccctggaaccag
agggtcagttttgcaaacgacatagctgctgggatgtcgtacctgcattccatgaatata
atccaccgggacctgaactcacacaactgtttagtccgagaggacaacacagtagtggtg
gcagactttgggctggctcggctcatggttgacgacaaacatgaggagaagttgccacag
ggcaaactgtccggcctgaagaagcctgaccgcaggaagaggtacaccgtggtgggaaat
ccgtactggatggctcctgagatgatccacggcaagagctacgatgagagagttgacatc
ttttctttcggtatcatgctctgtgagatcattggcagggtgaatgcagacccagactac
ctccccagggcaatggacttcggactgaacgtgtctggcttcctggagcattactacccc
cctgattgtccccctgccttcttccccatagctgctgtgtgctgtgaccttgatgcagac
aaacgccctgctttcaccaaactcgaggagtggctgcagaacctgaagatgcacttggac
attggtctgccgatggtgtctgaagtgagccagctgcaaaagaccttctgggaagaccac
agcatcatgcactccgagaacggcctgcacgttcaccccgaacagccggagtag
DBGET
integrated database retrieval system
