Scomber japonicus (chub mackerel): 128360416
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Entry
128360416 CDS
T09718
Symbol
chrd
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128360416 (chrd)
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GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
Motif
Other DBs
NCBI-GeneID:
128360416
NCBI-ProteinID:
XP_053176821
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Position
6:8337221..8351969
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AA seq
882 aa
AA seq
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MHCVQCLCEPQKSRRGKVFGKVNCKNIKQDCPDPDCDDPILLPGHCCKTCPKGDDVKKQT
DSVLDSFEYFHEKGKGKEDDLHKSYNDRSYLSSEDVGPGESRTDFVAVLTGVTDSWLPSS
SGVARARFSLTRTSLAFSITYQRMGRPSKIVFLDSDGTAAFEYRVPKGQSDMICGVWKNL
AKPLLQQLQSEQMRISMSTSTSRQEEVEGKIIKHRALFAETFSSTLTSEEENSGMGGIAM
LTLSDTENNLHFILILQGLIKHKDKDPLLVPIRVQLMYRHHILREIRANITSHDPDFAEV
LTDLNSRELFWLSRGQLEIAVATEGQDPLQISGFITGRKSCDTIQSVMSSGDALTPGKTG
GVGSAIFNLHDNGTLDYQVQVAGLTSDAVGLTIELKPRRRNKRSVLYDLTPEYSKATGRA
TGSWSRLEARHIHMLLQNELFINVATAHNQEGELRGQIKALPYSGLEAPRHELPIPLAGH
FVFPPVRTGASGHAWVSVDKQCHLHYEIIVAGLSKTDDLTVNAHLHGLAEIGELDDSSAT
HKRLLTGFYGSQAQGILKDISVELLQHLDQGTAFIQVSTKLNPRGEMRGRVHVPNNCEFG
TRGEVEEAEFDDLFVKDPEELKKDPHTCFFENQHHAHGSRWTPNYDKCFSCSCQKRTVIC
DPVICPVLTCSRTIQPEDKCCPICDGELYRTEPKDMNAPDRVEEHPEGCYFEGDQKMHAP
GTTWHPFVPPFGYIKCAICTCKGSTGEVHCEKVTCPVLTCSHPVRRNPSDCCKECPDEDR
TPAGLEHSDMMQADGPRHCKFGKNYYQNSDNWHPWVPVVGEMKCINCWCDHGVTKCQRKQ
CPVLTCTNITRREGSCCPECLDSKEEDDLTMKAPDKRRNWRH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcgtccagtgcctctgtgaacctcaaaagagtcgccgaggcaaggtgtttggg
aaagtaaactgtaagaacattaagcaggactgtccggaccctgactgtgatgatcccatc
ctgttgccagggcactgctgtaaaacctgccctaaaggtgatgatgtcaagaagcagacc
gactccgtgctggacagcttcgagtatttccacgagaagggtaaagggaaagaggacgac
ctccataaatcttacaatgatcgatcctacctgagctccgaggacgtgggacccggagag
agccgcaccgacttcgtggcggtgttgacaggagtgacggactcttggctgcccagctcc
agcggtgttgccagagctcgcttctctcttaccagaaccagcctggccttctccatcaca
tatcaaagaatgggtcgtcccagtaaaatagtcttcctggattcagatgggaccgccgcg
tttgagtacagggtacccaagggacagtcggacatgatctgcggcgtatggaagaacctg
gccaagcctctcctgcaacagctgcagtcggagcagatgcgcatcagcatgagcacatct
accagcagacaagaagaagtggaggggaagatcatcaaacacagagctctgtttgctgag
acattcagttccacgctgacatcggaggaggagaattccggcatgggaggcatcgccatg
ttgacgctgagcgacacagagaacaacctccacttcatcctcatccttcagggtctcatc
aagcacaaagacaaagaccctcttctggttcctatccgggttcagctgatgtatcgccat
cacatcctgagagagatccgagccaatatcacctctcatgatccagatttcgccgaggtg
ctgacagatctgaacagccgagaactgttctggttatctcgtggtcagctggagatcgcc
gtggcaaccgaaggtcaagatccactgcaaatctctggcttcattacaggcagaaaatct
tgcgacaccatccagagtgtgatgtccagcggtgatgcattgactccagggaagacggga
ggcgtgggctctgctatcttcaacctccatgataacggcacactagactaccaggttcag
gttgcaggtctcaccagtgatgcggtcggcctcacgatcgagctgaagccgcggcggcgt
aacaagcgctctgtgctgtacgacctgacgccagagtacagcaaggccacgggccgggcc
acgggcagctggagtcgtttggaggcccgacacatccacatgctgctgcagaacgaactc
ttcatcaatgtggccacggctcacaaccaggagggggagctgagggggcaaatcaaggcc
ctgccttacagcggcctggaggcacccagacatgagttgcccatccctctggctggccac
tttgtgttcccaccagtaagaaccggtgcttctggccacgcttgggtgtcagtggacaag
cagtgtcaccttcactacgagatcatcgtggcaggcctcagcaagaccgacgacctcact
gtgaacgcccacctccacggcctcgctgagatcggagagctggacgacagcagcgccacc
cacaagaggctgctgaccggcttctacggctcacaggctcagggaatcttgaaggacatc
agcgttgaactgcttcaacacttggaccaaggaacagcattcatccaggtcagcaccaag
ctgaacccccgaggagaaatgcgtggacgggtccacgtgccaaacaactgtgagtttggg
accaggggggaggtggaggaggccgagtttgacgaccttttcgtaaaagacccagaggaa
ctgaagaaagacccccatacctgcttttttgagaaccaacaccacgctcacggctcccgc
tggacgcccaactacgacaaatgtttctcctgcagttgtcagaagcgaactgtgatctgt
gatccggtaatctgcccggtgttgacctgctccagaaccattcagccagaggacaagtgc
tgcccgatctgtgacggtgagctttataggacggagcccaaggacatgaacgctccagac
agggtggaagaacatcctgaaggttgctactttgaaggagaccagaagatgcatgcccca
ggaactacatggcatccctttgtacctccctttggctacattaaatgtgctatctgcact
tgcaagggctcaacaggcgaggtgcactgtgagaaggtgacgtgtccggtgctgacatgc
agtcatccagtgagacggaatccctccgactgctgtaaggagtgtccggatgaggacaga
acccctgcaggcctggagcacagcgacatgatgcaagcagatggtccgagacactgcaaa
tttggcaagaactattaccagaacagcgacaactggcatccctgggtacccgtggtgggg
gagatgaagtgcatcaactgctggtgtgatcatggtgtgaccaagtgtcagaggaagcaa
tgtccagtactgacctgcaccaacatcacccgcagagagggctcctgctgtcctgaatgc
cttgattccaaagaggaagacgacctgacgatgaaggctccagacaaaaggcgaaactgg
agacattga
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