Scomber japonicus (chub mackerel): 128360434
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Entry
128360434 CDS
T09718
Symbol
slitrk3a
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128360434 (slitrk3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
128360434
NCBI-ProteinID:
XP_053176842
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Position
6:13276254..13279050
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AA seq
904 aa
AA seq
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MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCEVKEGIFHVHCDSKGFTNVSQIS
QIWSRPFKLNLQRNSMRKLYFNSFLHLNNAISINLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPNYLF
RSVSLTHLDLRGNRLKTLPYKGMLEYVGRSLMEIQLEENPWNCVCEIIQLKTWLERIPYT
ALVGEITCEYPFHLHGKDLRDIKRSELCPLLSDAEIEAKLGIPRIPFSNENTWPTKPSSM
LSSFHNTASSVEYKERVVKPTKRPRPTKNAPTPRSIYPGINQPPIAGYQTRPPIPIVCPV
GCMCNLHINDLGLTVNCKEKGFHNISDLLPRPVNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIEILTPGMFRGLQMLSYLYFEYNVIREI
QPNSFSLMPNLQLVFLNDNLLRSLPTDAFAGTNLARLNLRNNYFLSLPVHGALEHLTSIV
QIDLHQNPWDCSCDIIPLKQWLEKLSSVIVVGDVICKTPEFAFGKDLRSLEVEVICPELK
YSSGPSPALPGGDGITTGTPDMGEARGRGAVPLSVLILSLLIFFISAVFVAAGLFAFVLR
RRKKLPFRKRSEVDLTGIQMHCRMYEDPPRQSSTGNAGTPEKLTPSMHTHTHTGHTHAHG
HVYDYIPHPVTQMCNNPIYKPREGEIAEEERGQFSEKKDSGSSNNSNYRTLLEKEREWTL
AVSNSQLNTIVTVNHSTADMAGFHENGGLCPTVIDSQMPTPTVGFVDCLYGTVPKLKDMH
VAHAHPPGMQYPDLQQDAQLKETLLFTAGKGCYPDPSQSDYPESRSKLQTKPDYLEVLQK
SYRF
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccaatcccacta
ctagaggactccgaggagatcgacgagccctgcttcgagccctgttactgcgaggtcaaa
gagggcatcttccatgtccactgtgacagtaaaggatttacaaatgtcagccagatctcc
caaatatggagccggcccttcaagctcaacctgcagagaaactccatgaggaagctttac
tttaacagcttcctccatctcaacaatgccatatctattaatctgggtaacaatgccttg
caagatatccatgctggtgcattcaatggcttaggaatactcaaacggctgttcctacat
gagaacaaactagaagttttccggaatgacacttttcttgggttggagagtttagagtat
cttcaggcggactacaatgttattaaaaggattgaaagtggtgcattcaggcaccttcac
aaattgagagtactcatactaaatgacaatctgatccctgtgctcccaaattatcttttc
cggtctgtgtcactcacacatctagacctaagaggaaaccgactaaagacattgccgtat
aagggcatgctggagtatgttgggcggagcttaatggaaatccagctggaagagaacccc
tggaactgtgtgtgtgagattattcagttaaaaacatggctggagagaatcccttataca
gctctggtgggtgagatcacatgtgagtatccattccacttacatgggaaagacttacgg
gacatcaagcgcagtgagctctgtccgttgctttccgatgcagagattgaggccaagctg
ggaattccccgcatcccattcagcaatgaaaacacatggcccactaaaccttcctccatg
ctttcctcctttcacaacacagcatcttctgtggaatacaaggaaagagttgtcaagcct
actaagcgacctcggcccacaaagaatgccccaacccctcgtagcatttatccaggcatc
aaccagcctcccattgctggctaccaaacaagacctcctatcccaatagtttgtccagtt
ggatgtatgtgcaaccttcacatcaatgacctggggctaacagtgaactgcaaagagaaa
ggctttcacaatatctccgacctcctgccacgacctgtcaatgccaagaaattgtatctc
agtgggaacctaatacagaaaatctaccgttctgatttctggaacttctcaagcttggat
ttactgcatttaggaaacaatcggatatcctatgtccaagaaggcgcctttattaacctg
ccaaacttaaaaagtttatatctgaatgggaatgacattgagatacttacacctgggatg
tttagggggcttcagatgttgagttatctttacttcgagtataatgtcatacgtgagata
caacctaactctttctccctaatgccaaatctccagctggttttcctcaatgacaacctg
ttgcgctcccttcccactgatgcctttgctggcaccaaccttgcacgcctcaaccttcgc
aacaactacttcctttccctgcctgtgcatggagccctggagcatctgacctccatcgtc
cagattgatctccatcagaacccctgggactgctcctgtgatattatccctctcaaacag
tggctggaaaagctctcctctgtcattgtggttggagatgtcatctgcaagacaccagag
tttgcttttgggaaggacctgcgttcactggaagttgaagtcatctgtcctgaacttaaa
tattcctcaggaccctcgccggccctgcctggtggggatggcatcaccacagggaccccg
gacatgggggaggcaagggggagaggggctgtcccactgtctgtcctcatcctcagccta
ctcattttcttcatttctgccgtgtttgtggctgctgggctttttgcctttgttctccgc
cgcagaaagaagctgcccttccggaaacgttctgaggtggatctgacagggatccagatg
cactgcaggatgtatgaggacccaccaaggcagagtagtactggtaacgcaggcacacca
gagaaactaacacccagtatgcacacacacactcacaccggtcacacacatgcccacggt
catgtttatgactatatcccccaccctgtgactcagatgtgtaataaccccatctataag
ccaagggagggggaaatagcagaggaagagagagggcagttttcagaaaagaaagacagt
ggcagcagtaacaacagtaactatagaaccttgttagagaaagagagagagtggaccctg
gccgtctccaactctcaactcaacaccattgtcacagtcaaccactccacagctgatatg
gcgggatttcacgagaatggcgggctctgccccacagtgattgacagtcagatgcccaca
ccaactgtgggctttgtagactgtctgtatgggacagtacccaaactaaaggacatgcat
gtggcgcatgcgcatccaccaggcatgcagtacccagatttgcagcaggatgcacagctg
aaggagacattgcttttcacggcggggaaaggctgttaccccgacccgtcccaaagcgat
taccctgagtcaaggtccaaacttcaaaccaagccggattacctcgaagtattgcaaaaa
tcttaccggttttaa
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