Scomber japonicus (chub mackerel): 128360443
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Entry
128360443 CDS
T09718
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128360443 (trim59)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128360443 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
TRAF3_RING
Rootletin
BAR_3_WASP_bdg
Motif
Other DBs
NCBI-GeneID:
128360443
NCBI-ProteinID:
XP_053176852
LinkDB
All DBs
Position
6:complement(26048372..26053231)
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AA seq
430 aa
AA seq
DB search
MDNLEEDLTCSVCYCLFSDPRVLPCSHTFCKSCLDNLLQVSTNYSIWRPLRLPLKCPNCR
SVVELPPTGVDALPINVSLRAIIEKYQLDSEPRPPTCQEHHRQPLNMYCIQDRQLICGLC
LTVGDHQGHTIDDLQAAFIREKKTPSLLLARLSEQRWAQVCELGEQLEQEKARCEGLVRQ
DRQEVSQFFQALEAGLVRKRQACLEVLDNAAADVSRAYDPLIHRVKELQEEQLDLVSLGS
SVEEEDSPLIFLEKVHEFRERVEEFITVPLPSVINLSVTPRAAEYLQQHWPAVTIGSLEE
APVPRVYCCARCGSLEAEAERDPTHSRVQDLWFELQPTSAAVLLGLLLLLLAVLWVNPVG
GASLGFSLLSRFSQLVHGLSSELITCAWESAGSAYTVMEAAVERWSSQLSSAGEKGFQQI
TALFKTLTSH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctggaggaagacctgacgtgctcagtctgctactgtctgttctctgacccg
cgtgtcctgccgtgctcgcacaccttctgtaagagctgcctggacaacttgctccaggtg
tccaccaactactccatctggcgtccgctgcgcctgccgctgaaatgccccaactgtcgc
agcgtggtggagctgcccccgacgggcgtagacgcgctgcccatcaatgtatctctgcgg
gccatcattgagaaataccagctggacagtgagccgcgaccccccacttgtcaggagcat
cacaggcagcctctgaacatgtactgcatccaggatcggcagctgatctgcgggttgtgt
ctgactgtcggggatcaccagggccacaccatagatgacctgcaggcagctttcatccga
gagaaaaagaccccatcactgctgctagccagactctctgagcagagatgggcacaggtg
tgtgagctgggtgagcagctggagcaagagaaagctcgctgtgaaggcctggtgaggcag
gaccgacaggaagtcagtcagttttttcaggcgctggaggcgggactggtccggaagaga
caagcttgcttggaggttctggataatgctgctgctgatgtgtcacgggcctacgaccct
ctcatccacagggtgaaggagctacaggaagagcagctggacctggtgtctttgggttcg
tcagtagaggaggaggactcgccactgatcttcctggagaaggtgcacgagttcagagag
cgggtggaggagttcattacagtaccccttccctctgtgataaacctctccgtcactcca
cgggcagcagagtaccttcagcagcactggcccgccgtgaccatcgggagcctggaggaa
gcacctgtcccccgggtgtactgctgcgccagatgtggcagtctggaggctgaagctgaa
agggatccgactcacagtagggtccaggacctgtggtttgagcttcagcccacgtcggcc
gcggtgctgctggggcttctgctgctgctgctggcggtactgtgggtcaacccggtcggg
ggggcgtcgctcggtttctcgctgctctctcggttcagtcagctggttcacggcctgagc
agcgaactcatcacgtgtgcgtgggagtcggcggggtcggcgtacacggttatggaggcg
gctgtagaaagatggagctcacagctttcctcagcgggagaaaaaggcttccagcagatt
actgcattattcaaaactctgacatcccactga
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integrated database retrieval system
