Scomber japonicus (chub mackerel): 128360457
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Entry
128360457 CDS
T09718
Symbol
alkbh8
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128360457 (alkbh8)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
128360457 (alkbh8)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128360457 (alkbh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy_2
Methyltransf_11
Methyltransf_25
RRM_1
Methyltransf_12
ALKBH8_N
Methyltransf_31
Methyltransf_23
MetW
2OG-FeII_Oxy
RRM_occluded
PHM7_cyt
RRM_3
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
128360457
NCBI-ProteinID:
XP_053176869
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Position
6:30985081..31002062
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AA seq
730 aa
AA seq
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MDPNVDNKADVVKRSKEEKKVLRKQIKASHTLLKHEGISTTSQPTKSLVVANGGLGNSVS
REELSAVLKEMGEVETLVMPSHKPYAFVSYRSEESARKAHVHLNGRKLQCGDNSVTLYLI
FVDSVTCEEETSVPLPEGLVLVEDFVSLEEEALLLAAVDWSHANDDVTAQKALKHRRVKH
YGFEFRYDNNNVDKDKPLPAGLPEECQPILQRCVKLGHMDVTPDQLTVNQYESGQGIPPH
VDTHSAFEDTIMSLSLGAKTVMEFRHPDGRVVPVLLPGRSLLVMKGESRYLWTHGITPRK
FDMVPTCNPQSPTDATSDSGIHSNLTLSKRGTRTSFTFRRIRHEPCRCAFPSACDSQGAS
SVPSTSPPSPPSLPGCHADAARLEEEYVHRVYNTIASHFSSTRHSPWPRVCHFLSSLPPG
SVLADVGCGNGKYLGVNPEVTAVGCDRSSALIQICAERGFQAFVSDALSVPLRTASCDAC
ISIAVIHHFSTQERRLAAVRELLRLLKPGGRALIYVWAFEQEYKQQKSKYLKDCNKEHPG
NRSPNDSMSEDSQTPDGNKSEHADGHLEDDSETHTATHKPADNTSDVSKVTDGKLSVHTN
RTAFNTQDLLVPWHLKKGGGKKEGESGEGVKKDKRKDKSHPSGHNSNSDSSPGFDINKSK
PSPSGDTTQVSSCSVKSEPEPESVPPPVFHRYYHVFQQGELEQLCVQVAGVKVQSSYHDQ
GNWCVILEKD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaacgtggataacaaggctgatgttgtcaagaggagcaaagaggagaagaaa
gttctccgaaaacaaataaaagccagtcacactttactgaaacatgaaggcatcagcacg
acgtcgcagccgaccaagagtctggtggtggctaacggcggcctggggaacagcgtcagc
cgggaggagctctctgccgtgctgaaagagatgggagaggtggagactctggttatgcca
tctcacaagccttatgcttttgtctcatacaggtcagaggagagtgctcggaaagctcac
gtccaccttaatggccgaaagctgcagtgtggagataacagcgtcacactctatctcatt
tttgttgactcagtaacctgtgaggaggagacgtccgtcccgttgccagagggtttggtc
ttggtggaggacttcgtgtctctagaggaagaggctctgctgctagccgccgtagactgg
tcgcacgctaatgatgatgtcaccgctcaaaaagctctgaagcacagaagagtcaaacat
tatggatttgaatttcgctatgacaacaacaacgtggacaaagacaagccgttacctgca
ggtctacccgaggagtgtcagcctattctgcagcggtgtgtgaagctcggacacatggac
gtcacgccagaccaactgactgtcaaccagtacgagtcgggacagggtattcctcctcat
gttgacacccactctgccttcgaggacaccatcatgtcactgagcctgggtgcaaagacg
gtgatggagtttcgccatcctgacggccgtgttgttccagtgttgttgccaggacgcagc
cttctggtgatgaaaggagagagtagatatctctggacccatgggattactcctcgaaag
tttgatatggtgccaacctgcaacccacaatcccctactgatgcaacatctgactctggg
atccacagcaatctcaccctgagcaagaggggcacccgcacttccttcactttccgcagg
atcagacatgaaccgtgccgctgtgccttcccctctgcctgtgacagtcagggagcttcc
tcagtaccgtcgacctctccgccatctcccccctcacttccaggttgccatgccgacgca
gcccgtctggaggaagagtatgtgcaccgggtgtacaacaccatcgcctcccacttcagc
agcactcgacactccccctggcctcgcgtttgccacttcctgtcctcgctcccacctgga
agtgtgctggctgacgtcggctgcgggaatgggaaatacctcggcgtcaacccagaagtg
actgctgtgggttgcgatcgtagcagtgctcttatccaaatctgtgcagagaggggtttc
caggcatttgtgtcggatgcgctcagtgtcccgctacgaacagcctcctgcgatgcctgt
atctccatagctgtcatacaccacttttccacacaggagcgtcggctggcagcagtgagg
gagctgttgagactcttgaagcctggaggtcgagcgctcatatatgtttgggcttttgaa
caagagtacaagcagcagaagtccaagtacctcaaagactgcaacaaagagcatcctggg
aaccgcagcccgaacgacagcatgtcagaagacagccagacgcctgatgggaataaaagt
gaacatgccgacggacatttagaagatgacagcgaaacacacacagcgacccacaagcct
gcagacaacacatcagatgtcagcaaagtgactgatgggaaacttagtgtgcacacgaat
cgcaccgcctttaacactcaggatctgttagttccctggcatctgaaaaaaggaggagga
aaaaaggagggagagtcaggagaaggtgtaaagaaggataaacggaaagataaatctcac
ccaagcggtcacaactccaactctgattccagtccaggttttgacatcaacaaatctaaa
cccagtccaagtggcgacacgactcaggtgtccagctgcagtgtaaagtcagagcccgag
cccgagagcgtcccgccaccggtcttccaccgctattaccacgtcttccagcagggggag
ctggagcagctgtgtgttcaggtagctggagtcaaagtgcagagcagctaccacgatcag
ggaaactggtgcgtcatattagagaaagactga
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