Scomber japonicus (chub mackerel): 128360461
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Entry
128360461 CDS
T09718
Symbol
zgc:114130
Name
(RefSeq) mRNA decay activator protein ZFP36L1
KO
K18753
butyrate response factor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128360461 (zgc:114130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128360461 (zgc:114130)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128360461 (zgc:114130)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_UNK-like_4th
Zn_finger_prot
zf-CCCH_9
Torus
Motif
Other DBs
NCBI-GeneID:
128360461
NCBI-ProteinID:
XP_053176872
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All DBs
Position
6:30461396..30467253
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AA seq
425 aa
AA seq
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MPSYPLNQFADLEEMMCKQLFNLDLRDQSRQLASLSLAMRTPGCIGQPRSNNTSFSLSSL
SCLPTDSPDSVFQSSNQWGQQQSESPLPSQLPNSTQWGKQGFLSQRSVSMVETSSTTAAS
LGWPGSDTKLSQSDSCSSTSSTSSSRYKTELCRSFTENGLCKYGGKCQFAHGHDELRDLS
RHPKYKTEPCRTFHTIGFCPYGIRCHFVHNNEEEMKHSLSRSSSSSSSSSSVLPQPMPPS
RTHRPPLVRQSFSFAGFPSAPQPALQPALPAHPPPATNAFTRAPSASPPSCADITDLLSH
AFLEMDSAFEASPVHQYPPGMGQVTPADPRSPFLPSPDSGCSPCGLSPTASPSLRQSPSA
TGVFSGPLGTRSLSYTSLSDQDQDGGSSSASSLSGSDSCNNDGNGKRLAVFSQLSVPEDA
TGFCL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccatcttaccccctcaaccagtttgctgacctggaagagatgatgtgcaagcaatta
tttaatctggacctgagggaccagagcaggcagctagcatccctcagtctagcgatgaga
acaccaggatgcatcggtcagccgcgcagcaacaacacatctttttccctctcatccctc
tcctgcctacccacggattctccagacagtgtgtttcagtcctccaaccagtgggggcag
cagcagtcagaaagccctctgccttcccagcttcccaattccacccagtggggaaagcaa
ggcttcctgtcccagcggtcggtcagcatggtagaaaccagtagcaccacagcagcaagc
ctaggctggcccggctctgacaccaagctttcccaaagtgactcctgctcgtccacctcg
tccacatcctcgtcacgctataagactgaactgtgccgctccttcacggagaacggctta
tgcaagtatggtgggaagtgccagtttgcccacgggcacgatgagctgcgggatctaagc
agacaccccaagtacaaaactgagccatgtcgtacgtttcataccatcggcttctgcccc
tacgggatccgctgccacttcgtccacaacaacgaggaagaaatgaaacactccctctcc
cgttcatcctcatcttcttcctcctcttcgagtgttctcccccagcccatgcccccctct
cgcacgcacagaccccctctcgtcagacagagcttcagctttgctgggtttccgtctgct
ccccagccggcccttcagcctgccctccctgctcatcctcctcccgcaaccaacgctttc
acacgcgctccctcagcctctcctccttcctgcgctgacattaccgacctcctctctcac
gccttcctggagatggactcagccttcgaggcctcccctgtccaccagtacccacccggc
atgggccaggtcactccagcagatccacgctctccgtttctgccttccccagattctggt
tgttctccatgtggcctgtctccgaccgcctccccctccctgaggcagagtcccagcgcc
accggggtcttctcagggccgctcggtaccagatccctgtcatacacatccctgtcggac
caggaccaggatggaggaagcagctcagccagctcgctcagcggctccgattcctgcaat
aatgacggcaacggcaaacgtctggccgtattcagtcagctctctgttcccgaggatgct
accgggttctgcctttag
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