Scomber japonicus (chub mackerel): 128360471 Help Entry 128360471         CDS       T09718                                  Symbol brip1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03440   Homologous recombination sjo03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     128360471 (brip1)    03460 Fanconi anemia pathway     128360471 (brip1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sjo03400]     128360471 (brip1) Enzymes [BR:sjo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      128360471 (brip1) DNA repair and recombination proteins [BR:sjo03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      128360471 (brip1)    FA (Fanconi anemia) pathway     Downstream FA components      128360471 (brip1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD HBB DUF2937 Motif Other DBs NCBI-GeneID:  128360471 NCBI-ProteinID:  XP_053176881 LinkDB All DBs Position 6:complement(5507276..5545753) Genome browser AA seq 1228 aa AA seqDB search MASSAVDYTIGGVKINFPCKAYPSQLAMMNSIIRGLNYGQHCLLESPTGSGKSLALLCSA LAWQRAQIAKPDQGGSCAEDKSQSDKNSGDNKKPDVTTACQCVCHSKASCSSATSACKDA AQPLPTEQEIISFFEEEEPKKPTLASRLSEKFQSSLNSDREKDDDDFQTDRKRIRTAEHT SRKRQRLERGVIFIDDEPEQENHPPAPPSWTVEPNSHAAGLSSSCCSPEPCSRCPCASAK DGVKDKDKDKNEKKKIPKIFFGTRTHKQITQIARELKRTTYSGVPMTILSSRDHTCVNPE VAPHSNRNERCKDLLDAKDGRSCRYYHGVQKMRDQGTLQWAHGLYQAWDIEDLVSLGKRL RSCSYYAARELMAGAHIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCARESAS FTLDHKNLMMCREELDGMVNNKIRCSEHESLRDFCYCLVNWIQESQSMMSERGYESASKV WNGKDILGIFHGLGITAETFSILKKNLAAVLEKEDRVSTVNGKEDSVPVPTISSSTSTVL KNLFMVLDFLFRDNCRFSEDYRVALQRSYAWTNQIPPDIPDAQGFIVRQRNRHRQSVRVK AEVLTLSFWCLNPAVAFSDLSGTVRSIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIKK SQVWVGTIGAGPQGRKLCATFQHAETFAFQDEVGALLLHVCQVVAKGVLCFLPSYKMLDK LRDRWINTGLWEKLEQRKTVITEPRGGGKGDFDELLHTYYDAIKYCVERDGALLIAVCRG KVSEGLDFTDDNARAVITVGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGNRWYEIQAYR ALNQALGRCIRHKNDWGALILVDDRYRTNPNKYITGLSKWVRQLVQHHDTFNNAMQSLVA FSQMQQKAEVSSADSQILSSTLCSPSSQVPVTIEGQCPAKASEPQTPHPAVIPPEPQQDS PRSPLNFQFFSRTQLKNEQNGKAERLKTMQTPSAKPLSHPKKATQAFYQIFTSSPISNRF KKPIFKEKGPSNSFQHFETPNLPEPKEELLVPSPQKKTEECDLKPAAVEGSSEVKGEPHT PATVATPPSCKSELLPADNPDEDEEDEDKTVFFTPELFEGDVEEGSPHKETKTESPTRTV LEAESPVLLSEELFHSKQTQGQASMFDGQRAISASEESAELSQGQKEVKGQTQGEEGEQV KAQSRQTSSKLRRLSRSRQKAPPTPTGN NT seq 3687 nt NT seq  +upstreamnt  +downstreamnt atggcttcatccgcagtggactacaccataggaggggtgaagatcaacttcccctgcaag gcttacccatcccaactggccatgatgaattcaatcatacgagggttgaactatggacag cactgtttgctggaaagcccaacaggaagtggaaagagcctagccttgctctgctcggct ttggcctggcaacgggcacagattgcgaaaccggaccaaggaggaagctgtgcggaagac aagagccagtcagataaaaactctggagacaataagaagccagatgtcaccactgcctgt cagtgtgtgtgccacagcaaagccagctgtagctcagctacatctgcctgcaaggatgca gcgcagccgctaccaacagaacaagaaattatatcgttcttcgaggaggaagagcctaaa aaaccgacgttagcctctcgtctgtctgagaaattccagtcttccctcaactctgaccga gagaaagatgacgacgacttccagacagacaggaaacgaattcgcactgctgaacacacg agtcgtaaaaggcagcgtctggagcggggagtgatctttatagatgatgaaccagagcag gaaaatcatcctccagcacctccaagttggactgtggagccaaacagccatgcagccggt ttgtcttcatcatgttgctcccctgaaccatgctcccgttgcccatgtgcttcagccaaa gatggtgtgaaggacaaggacaaagacaaaaatgaaaagaagaagatcccaaagattttt tttggcacacgcacacataagcagatcacgcaaattgcccgcgagctgaagcgcaccact tactccggtgtgccaatgaccatcttatctagcagagatcatacctgtgtcaacccagag gtggcgccccactctaaccgcaatgaacgatgcaaggatctgttggatgccaaagatggc cggtcttgccgttattaccatggtgtccagaagatgcgggaccagggcacactgcagtgg gcccatggactgtatcaagcctgggacatcgaggacctagtctctttgggcaaacggcta cgttcatgctcttactacgctgctcgtgaacttatggctggtgcccatataatcttctgt ccatataattacctgcttgacccaatgataagagagagtatggagattgaccttgcaggc cagatcttggtgctggacgaagcccataacattgaggactgtgcaagggaaagtgccagc ttcacgttagaccacaagaatctgatgatgtgcagagaggagcttgatggcatggtcaac aacaaaatcagatgctccgaacatgagtccctcagggacttctgctactgtcttgtcaac tggatccaggagagccaaagcatgatgtctgagcggggatatgagagcgcctctaaagtc tggaatgggaaggatatactgggcattttccatggcctgggtataactgctgaaaccttc agcattctgaagaaaaacctggcagcagtattggagaaggaggaccgtgttagtactgtt aatggtaaagaggactcggtgccggtcccaaccatcagctcatctacctccactgtcctc aaaaacctcttcatggtgctggacttcctcttcagggacaactgcaggttttctgaggac taccgagtcgctctgcagaggagctacgcttggacaaaccagatcccacccgacatcccc gatgctcagggcttcatcgtcaggcaacgcaacagacaccgccaaagtgtccgagtcaag gcagaagtcctgactctcagcttctggtgtctcaaccctgctgtggccttttctgattta agtgggacagtgcgtagcattgtgcttacatcagggaccctgtcgcccatggggtccttc tcctcagaacttggggtgaaattctccatccaactggaggccaaccatgttatcaaaaag tcccaggtgtgggtaggcactattggtgctggaccccaaggcagaaaactgtgtgccacc ttccagcatgctgaaacatttgccttccaggacgaggttggggctctgctgctgcacgtt tgccaagtggtggccaagggtgtgctctgctttttgccttcctacaagatgctggacaag ctgcgggatcgatggatcaacactggtctctgggagaagctggaacagcggaaaactgtg atcacagagccccgtggtgggggcaagggggactttgacgaactgcttcacacgtactat gatgccatcaaatactgcgtggaaagagatggcgctctgctgattgcagtctgtaggggt aaagtgagtgaaggactcgacttcacagatgacaatgccagagcagtgatcactgttgga atccccttcccaaacattaaagacctccaggtggaactgaagatgaagtacaatgaccag cactgcaagtccagaggtcttctcccaggcaaccgctggtatgagattcaggcctaccga gctctaaaccaggccctgggcaggtgtatccgccacaagaatgactggggcgctctgatt ttagtggatgaccgttacaggactaatcctaataagtacatcacaggtctttccaaatgg gtccgccagcttgtccagcatcacgacaccttcaacaatgccatgcagtctctggtagcc ttctctcagatgcaacagaaggcggaggtgtcctctgcagacagccagatcctcagctct actctctgttctccaagcagtcaagtgccagtcactatagagggacagtgtccggccaaa gcctcagaacctcaaacacctcacccagcagttatacctcccgagccccagcaggatagt cccagaagtcccctaaacttccaatttttttctcgcacacagttgaaaaatgaacaaaat ggaaaagcagaacggttgaagacgatgcagactccctctgcgaagccactctcccatcca aaaaaagcaactcaggccttctaccaaattttcacctccagtcccatcagcaatcgcttc aaaaagccaatctttaaggagaaaggcccgagtaattccttccagcactttgaaacacct aatcttcctgagcccaaagaggaactgctcgttccctctccacaaaagaagactgaagag tgtgatcttaaaccagcagctgtagaggggtccagtgaagtcaaaggggaaccacacacc ccggctacagtagcaacccctcccagttgtaaaagcgaactgctcccggcagacaatcca gatgaagatgaagaggacgaggacaagactgtcttctttaccccagaactttttgagggt gatgtagaggaaggaagcccacacaaagagacaaagacagagtcacctaccaggacggtt ttagaggcagagagcccagttctgttgtcagaagaactttttcactctaagcagactcaa gggcaagcctctatgtttgatggacagagagctatttcagccagtgaggaaagtgcagag ctgtcacagggacagaaagaagtcaaaggacagacacaaggtgaggagggagagcaggtg aaagcacagagcaggcagacaagcagtaagctccgcagactgtccaggtccagacagaaa gctccccccactccaacaggtaactaa

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