KEGG   Scomber japonicus (chub mackerel): 128360483
Entry
128360483         CDS       T09718                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128360483 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sjo01009]
    128360483 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128360483 (pnkp)
Enzymes [BR:sjo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     128360483 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     128360483 (pnkp)
Protein phosphatases and associated proteins [BR:sjo01009]
 HAD phosphatases
  Other HAD phosphatases
   128360483 (pnkp)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128360483 (pnkp)
SSDB
Motif
Pfam: PNK3P AAA_33 FHA_2 Hydrolase_6
Other DBs
NCBI-GeneID: 128360483
NCBI-ProteinID: XP_053176899
LinkDB
Position
6:10320198..10327025
AA seq 640 aa
MISIRSFTFKCSLRYLTRGNIYNLYMAESNSVTAHTSCALVGASARVPLQDGRAVFLGRG
PDTGVTDKKCSRHQVKVVACFEDKDATVTQLGPNPSFLDEQKLGRGQSGKLTHGGTLYLV
NQNHPFKLHYSLSSNGITSSPAQKATEKTKGGKNGREKEGQWSPNPKRNIKDFFSASPKK
TSKRPLSPEMGHHGMKRQRKDEDVSGGWIKKEEEEEEDEEERLAEERLKQLQMFAEKSMT
EKSNSTQPSASSLSSKACVKSSWQQFGNLMLYTAAGVRASDKIAGFDIDGCIITTKSGKV
FPTAPDDWKILYPEIQPRLASLLKKGYKVVFFTNQMGIARGKLRPEVFKSKVEDILTKLQ
LPVQVFVAAGPGIYRKPAMGMWNHLCEKVNDGVPVDKTQSLYVGDAAGRPENWAPGKKKK
DFSCSDRLFALNIRLQFHTPEEYFLGWKSAPYNLPEFDPRKLDSSARLYDPPSASLTSSK
TEVIVAVGFPASGKSTFFHTHVIPQGYAYVNRDTLGSWQSCVAACERALREGRSVAVDNT
NPDPESRKRYLDVAKAAGVSCRCFHFSASLEQAKHNNRYREMAPSDSKHNKVNDMVFHSY
KKHFVAPALSEGFSEILHIHFVPNFKDSQSETLFRQFSEG
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgataagtattcggagcttcactttcaagtgttcgcttcgctatttaacaaggggaaac
atttataacctctacatggctgagagtaacagtgtgactgcccacacgtcttgcgcgctg
gtcggcgcctctgcccgggtccctctgcaggatggacgggctgtgtttctgggccggggg
ccggacaccggagtcaccgacaagaaatgctccagacaccaggtgaaggtggtggcttgc
tttgaggacaaagatgcaactgtcactcagctgggtcccaatcccagtttcctggacgaa
cagaaactgggccgtggccagtctggtaaactcacccacgggggcaccctctacctggtt
aaccagaaccacccatttaaattgcactactccctgagctcaaatggaataacctctagc
ccagcacagaaagccacagagaagacaaaaggagggaagaatgggagagaaaaagagggg
cagtggagtcccaaccctaagcgtaatataaaggatttcttctctgcctcacccaagaag
acatctaagaggccactgagcccagagatggggcaccatggcatgaagcgccaaagaaaa
gacgaggatgtctcaggtggatggattaaaaaagaggaggaggaggaggaggatgaagag
gagagactggcagaggaaaggctcaagcagctgcagatgtttgcagagaagtcgatgaca
gagaagagtaacagcacccagccttcagcgtcttcattgtcttcaaaggcttgtgtaaag
agcagctggcagcagtttggcaacctgatgctttatactgcagctggggtcagagccagt
gacaagattgctggctttgatatagacggttgcatcatcaccaccaagtctggcaaagtc
tttccaactgcaccagatgactggaagattctgtaccctgagattcagcctaggctggcc
agcttgcttaagaaaggatacaaggtggtgttcttcaccaaccagatggggatcgctcga
ggcaaactcagaccagaagtctttaaatctaaagtggaggacatcctcaccaagctgcag
ctacctgtgcaggtgtttgtagctgctggtcctggtatctacaggaagccagcgatggga
atgtggaatcacttgtgtgagaaggtgaatgatggtgttcctgttgataagacacagagt
ctttatgtcggagatgctgcaggtaggccagagaactgggctccagggaagaagaagaag
gatttctcctgcagtgaccgactgtttgctctgaacatcaggttgcagttccacactcca
gaggaatacttcttgggctggaagagcgccccctacaacttacctgaatttgaccctagg
aaactcgactcctctgccaggctgtatgacccgccgtctgcctccctcacctccagcaag
acagaggttattgttgctgtgggtttccccgcatcgggtaaatccactttcttccacacc
catgtcataccacagggctatgcatacgtcaacagggacacgcttggttcgtggcagagc
tgtgtggctgcatgtgagcgcgctctgagggagggccgcagtgtcgccgtggacaacacc
aacccagacccagagtctcgaaaacgatatttggatgtggccaaggcagcaggagtgtcc
tgtcgctgtttccacttctcagcctctctggaacaagccaaacacaacaacagataccgt
gagatggctccctcagacagcaaacacaacaaggtcaatgacatggttttccacagctac
aaaaaacactttgtggctcctgctctctccgagggattctccgagattctccacatccac
tttgtacctaacttcaaagacagccaatcagaaacgttgttccgacagttctccgaaggc
tga

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