Scomber japonicus (chub mackerel): 128360592
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Entry
128360592 CDS
T09718
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128360592
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128360592
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128360592
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128360592
NCBI-ProteinID:
XP_053177033
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Position
6:complement(16331031..16339548)
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AA seq
503 aa
AA seq
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MTYIIILSWALLYLVFSFSSQLPWSSCNNYWNTEHCVDFSTRNDTFTWTNQTNTTSAATE
FWEHRVLSISRGIEEIGSIRWELLLCLITMWVICYFCIWKGVKSTGKVVYFTATFPYGML
LILLIRGLSLPGALQGVVFYLLPEPSRLTDPQVWMEAGAQIFFSYSIGVGSLIVLGSYNP
YNNNCYKDCLWLCLLNSGTSVVAGFAVFSVLGFMAHEQGVPIAEVAESGPGLAFIAYPQA
VAMMPLPQLWSICFFIMLILLGLDTQFVAMEVVMTSVIDMFPTVMRRAGRRERFLLLFCL
ICFFSQLVMVTEGGMYVFQLLDYYACNGACILFLCVFESLALGWLFGADQLYGIIKDMTG
VHANSFFKICWRYLTPLVSLGTFICSLVEYQPLTFNRWYVYPAWAYVLGWMLAFSSILLV
PGWALYKLSTGTGTLSQIKIVSKTSVVHPAVKLEPGMERKECGEEPHSMPQSENRTNIFP
IDFRELRKSDEVSELHIVAKEYH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacctacatcattattctgtcctgggctttgctctacctggtgttctccttcagctcc
cagctcccgtggtccagctgcaacaactactggaacacagagcactgcgtagacttctca
acaagaaatgacaccttcacatggaccaaccagacaaacacaacctctgctgccacagag
ttctgggagcatcgggtgctgtccatctcacgagggattgaggaaataggcagcatcagg
tgggagttgctgttgtgccttatcactatgtgggttatctgctacttttgtatctggaaa
ggggtcaagtctacaggaaaggtggtgtatttcactgctaccttcccctatgggatgttg
ttaattcttttgattcgtggactctctcttcctggggctctacaaggagtggtgttttat
cttctgcccgaaccctcacgactcacagaccctcaggtgtggatggaggctggggctcag
atcttcttctcttacagcataggtgtgggttccttaattgtactcggcagctacaaccct
tacaacaacaactgctataaagactgcctgtggctgtgtttactgaatagtggcaccagt
gtggtagctggatttgctgtcttctctgtgctgggatttatggctcatgagcaaggcgtt
cccattgcagaagtggctgaatcaggtccaggcctggcgtttattgcataccctcaggct
gtggccatgatgcccctgcctcaactgtggtccatctgtttctttatcatgctcattctc
ttgggcctggacacacaatttgtcgcaatggaagtagtgatgacatccgtcatcgacatg
tttcccacagtgatgcgccgggcaggcaggcgggagcgtttcctcctcctcttctgcctc
atatgcttcttctcgcagcttgtcatggtcactgagggagggatgtatgtgttccagctg
cttgactactatgcctgtaatggtgcctgcatcctctttctctgcgtgtttgaatctctg
gcactgggatggctttttggagcagaccagctatatggcatcataaaggacatgacaggt
gtgcatgccaactcattctttaaaatctgctggcgctacctcactccactggtgtcactg
ggtacttttatatgttctcttgtggagtaccagcctcttacctttaatcgttggtatgtg
tacccagcctgggcatatgtgttgggctggatgctggccttctcctcaatcctgctggta
ccaggatgggcactttataagctgagcactggaactggcaccctcagtcagattaaaatt
gtcagtaaaaccagtgttgtgcaccctgcagtgaagttagagccaggaatggagcggaag
gagtgtggtgaagagccccactccatgccccagagtgagaataggaccaacatttttccc
attgatttcagggagcttagaaagtctgatgaagttagtgaacttcatattgttgccaag
gagtatcattag
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