Scomber japonicus (chub mackerel): 128360676
Help
Entry
128360676 CDS
T09718
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128360676 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128360676 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128360676 (srsf1a)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
SR proteins
128360676 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
128360676
NCBI-ProteinID:
XP_053177139
LinkDB
All DBs
Position
6:complement(23170108..23174474)
Genome browser
AA seq
245 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVI
VSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE
GETAYIRVKLDGPRSPSYGRSRSRSRGSRSRSRSRSASRSRSNSRGRGRGSPRYSPRHSR
SRSRS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgtcgtgcgggggcctgcggggaacaacgactgtcggatttacgtcggaaac
cttcctccagatatccgcacaaaagacgtggaggacgtcttctacaaatacggcacgatc
cgagacatcgacctgaagaacaggagaggggggccgcctttcgccttcattgagttcgag
gaccccagggacgccgatgatgcagtgtatggacgtgatggatatgactacgacggctac
agactgcgtgtggagtttcctcggagcggcagaggctccagaggaggtttcggcgggatc
ggcggtgctcctagagggagatatgggcctccatccagacgctccgagtacagggtgatt
gtgtcagggctccctcagagcggcagctggcaggacctgaaggaccacatgcgtgaagca
ggcgacgtgtgctacgctgacgttttcagagatggaactggcgttgtagagtttgtgcgc
aaagaagacatgacctatgccgttcgaaaactggacaacaccaaattccgctcacatgag
ggagagactgcttacattcgtgtgaaattagacggtccccgcagcccaagttacggaaga
tcacgctctcgcagccgtggcagccggagcaggagccggagtcgcagcgccagccgcagc
cggagcaattcccgtggccgtggcagaggatcaccccgctactcacctcgtcacagccgc
tctcgctcccgttcttaa
DBGET
integrated database retrieval system
