Scomber japonicus (chub mackerel): 128360693
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Entry
128360693 CDS
T09718
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128360693 (vps53)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Others
EARP complex
128360693 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
128360693 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Syndetin_C
hAT-like_RNase-H
Laminin_II
Sec8_N
NBD94
Motif
Other DBs
NCBI-GeneID:
128360693
NCBI-ProteinID:
XP_053177157
LinkDB
All DBs
Position
6:complement(29773258..29800122)
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AA seq
831 aa
AA seq
DB search
MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNTVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFESLLAK
RFTGCTLTDVPGQKKPETPLESTNPFLEDDPGEDVGTEKDEDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKEGSEA
AKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaatttgaatttgcggaggatttggaggctattttgcatctcact
ccggaggtgcaactagctattgaacaggttttccccagccaagacccactggacagagca
gacttcaatacagtggagtacatcaacacactattccccactgagcagtctttggctaat
attgacgatgtggtaaacaagattcgtctgaagattcggcgtctggatgacaacatcagg
actgtggtgagaggccagaccaatgtgggtcaggatggtcgacaagcgttggaagaggcc
cagatagccatccagcagctttttggcaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtcaaggagattacaagggacataaagcagctggaccatgccaagcgc
cacctcactacatccatcaccaccttaaaccaccttcatatgttggcgggaggcgtggac
tctttagaagccatgaccagaaagagacagtatggtgaggtggccaacctgcttcaggga
gtggtcaacgtgcttgaacatttccacaaatacatgggcataccccagatcagacaactt
tcagagagagtaaaagcagcacagagtgagttggggactcagattctggcagattttgaa
gaagccttcccttctcagggctccaagagaccagggggtcccagtaatgtgcttagagat
gcctgtctggttgcaaatgtgctcgatccacgcatcaagcaggagattatcaaaaagttc
atcaggcagcacctctctgagtacctggtgctcttccaggaaaaccaagatgttgcatgg
ctggacaagatcgatcgccgctacgcctggatcaagcgtcaacttgtcgactacgaagag
aaatatggacgcatgtttcctgaagagtggtgcatgacagagcgtattgctgtggagttc
tgccacatcaccagggtggagcttgccaaagtcatgcgaactcgagctaaggagatcgag
gtgaagctgcttctgttcgccattcagaggaccacaaacttcgagagtctgttggccaaa
cgcttcacaggatgcaccttgactgacgtacctggacagaagaagccagagactcctcta
gaatccactaacccctttctggaggatgacccaggtgaggatgttggcacagagaaagat
gaagatctggccaagcccaggaaacccaaagctccggacaaccctttccacggcattgtc
tccaagtgctttgaacctcatctatatgtctacatagaatcccaagacaagaacctgggc
gaactgattgaccggtttgtggctgacttccgagcacagggcccacccaaggcaggcaca
gaggagggtggagcagtactgccaagctgtgccgacctctttgtttattacaagaagtgc
atggtgcagtgctcccaactgagcactggagagcccatgattgccctcacaaccatcttt
cagaaattcctgagggagtatgcctggaagatcctctctggcaacctgcctaaatccagc
agtaacagtggaggtctcaccatcagcagtttactgaaagagaaagaaggttcagaagca
gcaaagttcaccgtggacgagctttgcctcatctgtagcatcctcagcactgctgagtac
tgcctggctaccacacaacagctggaagagaagctaaaggaaaaagtagataaagtcctg
atggagagaattaatttgactggagagatggatacattcagcactgtgatctcaaacagc
atccagctacttgttcaagatctcgatgctgcatgtgaccctgctctcactgctatgagc
aagatgccgtggcagagcgtggagcacgtgggtgaccagagtccttatgtgacttcaatc
atcatgcacattaagcagaatgtgccgatcatcagagacaatctagcctctacacgcaaa
tacttcacacaattctgcatcaaatttacaaactctttcatccccaaatttatcaaccac
ttgttcagatgtaagcctatcagcatggtgggagctgaacaactccttctggacactcac
tccctgaagaccgtcttgttggatctgccctccataggttctcaggtgctccgcaaggcg
cctgccagctacaccaagatcgtggtgaaaggcatgacccgtgcagagatgatacttaag
gtggtgatggccccacatgaaccgccagtggtgtttgttgataactacatcaagctcttg
gctgatggcaatcctgagaccttccagaagattctggacatgaagggtttgaagcgcagt
gaacagagcagcatgctggagctcttcaggcagaggttacccactccaccctctggggca
gacggcggtccctctctatccttcagtgcccccacccctgagcaggagtcgtcccgcata
cgcaaactagaaaaactcatcaagaagagactgtga
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