Scomber japonicus (chub mackerel): 128360755
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Entry
128360755 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128360755
04121 Ubiquitin system [BR:
sjo04121
]
128360755
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128360755
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128360755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
DBD_Tnp_Hermes
DUF659
PspAA
Motif
Other DBs
NCBI-GeneID:
128360755
NCBI-ProteinID:
XP_053177226
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Position
6:complement(3458085..3459659)
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AA seq
497 aa
AA seq
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MASERDAEKRKFEVAPSSYKSVVWDHFGFAVDYDADGKRIVNKQSTVCKHCYASVGYATG
NTTNMFSHLRRHHPSVSIGRARSTSATANVNRPQPTIAASFQQQFATSSDKHKTITKAVG
VFISKDMQPYSVVEDSGFRHMMKTIEPRYHVPSRTHFSGKVIPELYEACRGDIANELKQA
PYLALSTDSWTSRATVSYLTVTVHYIVDWKIKAFVLQTHPLYESHTSEHLADELLHAVTE
WKLERASIPIPVTTDNAQNIVNAIRNTASFGPHVGCFAHSLNLAAKKVVSLNPVSRLLGK
IRKVVTFFHKSTTAHKVLAEKQVMLNIPQHRLIHDVTTRWNTVHDMLEQQPAIYSALLDK
AVKKSAKDMSMLTDSELKLAEELIQLLNPLKKMTTLMSSESTPTSSMILPLKTMTLKSMA
PDSQDSPTIRDAKAAVTKDLEKRYTDPDLLDFLHRATVLDPRFKSLPIIDEAMCDQVYKD
LTSEIMEHQFQEGPSNE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaagagacgcggaaaaaagaaagtttgaagtggcaccgtcttcgtacaag
tctgtggtgtgggaccattttggatttgccgttgactacgatgcagacggaaaaagaatt
gtcaacaaacagtctactgtgtgcaagcattgctatgcaagcgtcggatacgcaacaggt
aacacaaccaacatgttctcccacctacgccgccatcacccgtctgtttcaattggaaga
gcacggagcacatcggcgacagctaatgttaaccggccgcaaccgacaattgctgcgtcg
ttccaacagcagtttgcaacaagctccgataaacacaaaacaataacaaaagcagtgggc
gtcttcatatcaaaagacatgcagccctattcagtggtcgaggatagcggatttcgccac
atgatgaaaaccatcgaaccacgttaccacgtaccctcccgcacccatttcagtggtaaa
gtgatcccagagctgtatgaagcatgccggggggatattgcaaacgaactgaaacaagca
ccctaccttgctctttccaccgacagctggacctcacgtgcaaccgttagctacctgaca
gtgaccgtgcactacatagttgattggaaaattaaggcattcgtgctacagactcatccg
ttgtatgagagccatacaagtgaacacctggcggatgaattactgcatgctgttaccgaa
tggaagctggagagagcaagtatccccattcctgtaaccacagacaatgcacaaaatatt
gtgaatgctatccgtaatacagctagctttggaccacacgtcggctgctttgcacacagc
ctaaatctcgcagctaagaaagttgtctccctcaacccggtgtcccgtctcctcggcaag
atcagaaaagtggtgacatttttccacaaaagcaccactgcccacaaagttctggcggaa
aaacaggttatgttaaacataccacaacaccgattaattcatgacgtcacgacccgctgg
aatactgtacatgacatgctggagcaacaaccagccatttactctgcattacttgacaag
gctgtgaaaaagtctgcaaaagatatgtcaatgctgactgacagtgaactgaagctggca
gaggaactcatccagctgctaaacccacttaagaagatgacaactttgatgagcagtgaa
tcaactcccacctcatccatgattctccctctcaaaacaatgacactgaaatccatggca
ccagattctcaggacagtccaaccatccgggacgccaaggcagcagtcaccaaggacttg
gagaagaggtatactgatccagatctcctggacttcctgcacagagccacagtacttgac
ccaaggttcaagtcattacccattattgatgaagccatgtgtgaccaagtctacaaggac
ctcacaagtgaaataatggagcatcagtttcaagaaggcccaagcaacgagtag
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