Scomber japonicus (chub mackerel): 128360757
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Entry
128360757 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128360757
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Gene silencing
Transposable elements
128360757
BRITE hierarchy
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
128360757
NCBI-ProteinID:
XP_053177228
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Position
6:complement(3510137..3511301)
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AA seq
309 aa
AA seq
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MACPFLEDVLDEETLIIRRAFRRERVFRDRSDPLAFGDDHLIERYRFSADGLRYLCRLLG
PKIQHQTARSQALTVPQMVCVTLRFFASGSFLYSVGDAENLNXICRTIRRVCLVLKSLVH
IFMTFAGHRRPLYIMEEFYKIAAFPNVIGAVDCTHIKIKRPSGEHEEDFINRKSFHSINV
QMICDADCLISNVEAKXPGSVHDYRVFHVSPIYERLSQGEFSGVLLGDKGYACESFLLTP
FADPQTSPQQAYNHGHAKTRARIEMTFGLLKSWFQCLNYLRFSPDRACDLVAACAVLHNT
ACLRKERAP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcccttttttggaggatgtgctggatgaggaaaccctaatcatcagacgagca
tttaggcgtgagagagtcttccgggacaggtcggacccattggcttttggagatgaccat
ctcattgagagatatcgattctcggccgatggactgagatatttatgtaggctgctgggg
ccaaaaatacagcaccagacagcacgaagccaggccctcactgttccacagatggtctgt
gttacactgaggttctttgcaagtgggagcttcctttattctgttggggatgcagagaac
ctcaatnnaatatgccgcacgataagacgtgtttgtctggtgctgaagtctcttgtgcat
atatttatgaccttcgctggccacagaagacccctatacattatggaggagttctacaag
attgcagctttccctaatgtcattggtgcagtggattgcactcacataaaaatcaaacgg
ccatcaggggaacacgaggaggactttattaacagaaaatccttccacagcatcaatgtt
cagatgatctgtgatgctgactgccttatcagcaatgtagaggcaaaatgacctggctca
gtccatgactacagagtctttcatgtgagtccaatttatgagagactctcacaaggtgaa
ttctctggtgtgctgctgggagacaaaggctatgcttgtgagtccttcctattgactccc
tttgcagacccccaaacctcaccacagcaggcctacaaccatggtcatgcaaagacaagg
gctcgaatcgagatgacctttggccttctaaaatcctggtttcagtgcctgaattacctg
aggttttccccggacagggcctgtgatctggttgcagcatgcgcagtgctgcataacact
gcatgtctgagaaaggagagggccccctga
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