Scomber japonicus (chub mackerel): 128360802
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Entry
128360802 CDS
T09718
Symbol
pipox
Name
(RefSeq) peroxisomal sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00260
Glycine, serine and threonine metabolism
sjo00310
Lysine degradation
sjo01100
Metabolic pathways
sjo04146
Peroxisome
Module
sjo_M00974
Betaine metabolism, animals, betaine => glycine
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128360802 (pipox)
00310 Lysine degradation
128360802 (pipox)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128360802 (pipox)
Enzymes [BR:
sjo01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
128360802 (pipox)
1.5.3.7 L-pipecolate oxidase
128360802 (pipox)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAO
HI0933_like
NAD_binding_8
Pyr_redox_2
GIDA
Pyr_redox_3
Thi4
FAD_oxidored
FAD_binding_2
Amino_oxidase
Motif
Other DBs
NCBI-GeneID:
128360802
NCBI-ProteinID:
XP_053177286
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Position
6:complement(4054468..4111120)
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AA seq
388 aa
AA seq
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MSTKEEYDCIVIGAGVQGSFTAYQLAKNNKKTLLLEQFVLPHTRGSSHGQTRIIRKAYEQ
DFYTHMMEECYQLWAQLERETGVKLYRQTGLLVMGPEKSENYQMFKNTLQKNKVPTVVLN
RDNFSQHIPHVTLAEGDGAVVDITAGVLYADRALKTVQGQFQKLGGVIRDKEKVTDIKPG
PTVKVSTSAGVYAAKSVVITAGPWANRLLAHTGLQLPLEVVKINVCYWKEKVPDTYNVKK
RFPCFLLTEGEEANEHIYGLPSNEYPGLVKICYHMGSVTDPDQRDKQRDRSDIDILQRYV
ARCLPKLDPEPAVVESCMYTLTPDRHFVLDCHPAHRNIVIGAGFSGHGFKFGPIIGKLLC
ELSLGEVPSYDLSPFRIRRFQAKPKSAL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactaaagaggagtatgactgcatagtgatcggggccggggtccagggctccttc
acggcttatcagctggcaaagaacaacaagaagactcttctgctggagcagttcgttctg
cctcacacccgagggagctcccatggccagacccgcatcatccgcaaggcctacgagcag
gacttctacacccacatgatggaggagtgctaccagctgtgggctcagctggagagggag
actggtgtcaaactgtacagacaaacaggactgctggtgatgggaccagagaagagtgag
aattaccagatgtttaagaacaccctgcagaagaacaaggttcctactgtggtcctgaac
cgtgacaacttcagccagcacatcccccatgtcaccctggctgaaggagatggagcagtg
gtggacattactgctggagtgctgtatgctgaccgagcactcaaaactgtacagggccag
tttcagaagttgggtggtgtcatcagagacaaagagaaggtaacagacatcaagcctggt
cctactgtgaaggtgtcaacttctgctggtgtttatgcagccaagagtgtggtgatcact
gctggaccctgggccaacagactgctggcccacactggcctgcagctaccactagaggtg
gtaaagattaacgtgtgctactggaaagagaaagttcctgacacatacaacgtgaagaag
cgctttccctgcttcttactgactgagggagaggaggccaatgagcacatctacggcctc
ccgtccaatgagtacccaggcttggtgaagatctgctaccatatgggcagtgtgacagac
ccagaccagagagacaagcagagagacagatctgacattgatatcctccagcgctacgtg
gcccgctgtttacctaaactggatcctgaacctgccgtggtggagagctgcatgtatacg
ctcacaccagaccgtcattttgtgctggactgccacccggcccaccgcaacattgtgatt
ggagcaggattctcaggtcatggcttcaagtttggaccaatcattggcaagctgctgtgt
gagctcagcctgggagaagtgccgtcctatgacctttcacctttccgtattagacgcttc
caggccaagcccaaatcagctttgtag
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