KEGG   Scomber japonicus (chub mackerel): 128360875
Entry
128360875         CDS       T09718                                 
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03020  RNA polymerase
sjo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128360875 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128360875 (polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sjo03021]
    128360875 (polr2i)
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128360875 (polr2i)
Transcription machinery [BR:sjo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     128360875 (polr2i)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128360875 (polr2i)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_recom Zn_Ribbon_TF Zn_ribbon_GRF_2 Zn_ribbon_NrdR HVO_0758 GpA_ATPase Lar_restr_allev SR1P Zn_ribbon_Top1 DZR
Other DBs
NCBI-GeneID: 128360875
NCBI-ProteinID: XP_053177393
LinkDB
Position
6:complement(14862566..14866337)
AA seq 126 aa
MDLETGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatttggagactggaacatacgaaccaggatttgttgggatacggttttgtcaagaa
tgtaacaacatgttataccctaaagaagacaaggagaaccgtatcctgctgtatgcgtgc
aggaattgcgactaccaacaagaggcagacaacagctgcatctacgtcaataagatcacc
cacgaggttgatgagttaacacaaatcatcgctgatgtatctcaagatccaacgctacca
aggacagaggatcacccttgtcccaaatgtggccacaaggaggcagtgttcttccagtct
cacagtatgaaggctgaggatgctatgaggctgtactacgtctgcacggcccctcactgt
ggacacagatggacggagtaa

DBGET integrated database retrieval system