Scomber japonicus (chub mackerel): 128360911
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Entry
128360911 CDS
T09718
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128360911
CD molecules [BR:
sjo04090
]
Proteins
128360911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Ig_2
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
128360911
NCBI-ProteinID:
XP_053177441
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All DBs
Position
6:37949731..37989921
Genome browser
AA seq
1123 aa
AA seq
DB search
MDLLLMLLLLLWSSGLQAEDEHQSTEPVRLVGGASRCAGTLELKYGEWRPVSYDVFRGTL
KSAAVACRKLDCGSAVSTGSRKESSDRLAWLIDSDCLQSGSALRDCVSSPPFPSSSMLEL
TCSDSVRLLNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQGALY
GEVEAPMWTKEFQCGGHESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGT
LEVKQGEWRPVSYSDSSWTLKEAAVACRELDCGSAVSTGSRNESSDRPVWEIRPHSLQSG
SALRDCVSSESSSSMVELTCSDSVRLVNGASLCSGRLEVKSEQSWSSVCEADFDQQDAEV
VCRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALLDCRRSDSARRTCSPGKAVGL
TCSQETVRLVGGASRCAGTLEVKYGEWRPVGDYQWTLKEAAVVCRELDCGSAVSTGSRDE
SSDRPVWLIHPDCLQSGFALRECLSSSPFPSSSMLELTCSDSVRLVNGTSLCSGRLEVKS
EQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGHESALLD
CRRSDSARRTCSPGKAVGLTCSQETVRLVGGASRCAGTLEVKLGEWRPVSDDGFLSDWTL
KEAAVVCRELDCGSAVSTGNRNTSDRPVWRISSDCLQAGSALKDCVSSGSSSSMFELTCS
DSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQGALYGEV
EAPMWTKEFQCGGHESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTLEL
KRGEWRPVKYSYWTMKEAAVACRELDCGSAVSTGSRDESSDRPLWFIRPDCLQSGSALRE
CALLLPFSSSMVELTCSDLLLQPIISVSPTMDGVTGAQQQGFQVLQGSNFTISCSVQPQY
PGGSFQLTFTSSNTAYNYTQPAVSHSADFLFPAADPTHQGSYSCVYGVFVFSHNFSSESR
LLSVTVTDPKGFIIRLVVVLLVALLLSNTAVYFILKASRGQKSDPQENIELDYYNLGVSR
AEGEPTGEEGEPAGEEGEPAGEEGEPTGEEGEPAGEEGARGAE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctgctgatgctgttgctgttgctgtggagctcaggactccaggctgaagat
gaacaccaatcaacagagcctgtcaggttggtaggaggagccagtcgctgtgcaggtaca
ctggagctgaaatatggagagtggagaccagtgagttacgatgtctttcgcgggaccctg
aagtcagcagctgttgcctgcagaaaattggactgtggctctgctgtttcaacaggaagc
agaaaggagtcctcagacagacttgcatggttgatcgactctgactgtcttcagtctgga
tctgcactgagggattgtgtatcatcaccaccatttccctcttcctccatgttggagctc
acctgctcagactctgtcaggctgctgaatgggactagtctgtgttcaggcagactggag
gtgaagtctgagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgca
gaggtggtctgtagggagcttggctgtggggctccttcagtcctccagggggcgctctat
ggagaagtggaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgct
ctcctggactgtagaagatcagactcagctagaagaacttgctcacctggtaaagctgtt
ggactcacctgctcagagcctgtcaggttggtgggaggagccagtcgctgtgcaggtaca
ctggaggtgaaacagggagagtggagaccagtgagttactctgactcttcctggaccctg
aaggaagcagctgttgcctgcagagaattggactgtggctctgctgtttcaacaggaagc
agaaatgagtcctcagacagacctgtatgggagatcagacctcactctcttcagtctgga
tctgcactgagggactgtgtatcatcagagtcctcttcctccatggtggagctcacctgc
tcagactctgtcaggctggtgaatggggctagtctgtgttcaggcagactggaggtgaag
tctgagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtg
gtctgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaa
gtggaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctg
gactgtagaagatcagactcagctagaagaacttgctcacctggtaaagctgttggactc
acctgctcacaagagactgtcaggttggtgggaggagccagtcgctgtgcaggtacactg
gaggtgaaatatggagagtggagaccagtgggtgactatcaatggaccctgaaggaagca
gctgttgtctgcagagaattggactgtggctctgctgtttcaacaggaagcagagatgag
tcctcagacagacctgtatggttgatccaccctgactgtcttcagtctggatttgcactg
agggaatgtttatcatcatcaccatttccctcttcctccatgttggagctcacctgctca
gactctgtcaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgctcttctggac
tgtagaagatctgactcagctagaagaacctgctcacctggtaaagctgttggactcacc
tgctcacaagagactgtcaggttggtgggaggagccagtcgatgtgcaggtacactggag
gtgaaactgggagagtggagaccagtgagtgacgatggctttttgtctgactggaccctg
aaggaagcagctgttgtctgcagagaattggactgtggctctgctgtttcaacaggaaac
agaaacacgtcagacagacctgtatggaggatcagctctgactgtcttcaggctggatct
gcactgaaggactgtgtatcatcaggttcctcttcctccatgtttgagctcacctgctca
gactctgtcaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctccaatgtggaccaaagagttccagtgtggaggccatgagtctgctctcctggac
tgtagaagatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacc
tgctcagagcctgtcaggttggtgggaggagccagtcgctgtgcaggtacactggagctg
aaacggggagagtggagaccagtgaaatactcttactggacgatgaaagaagcagctgtt
gcctgcagagaattggactgtggctctgctgtttcaacaggaagcagagatgagtcctca
gacagacctttatggttcatcagacctgactgtcttcagtctggatctgcactgagggaa
tgtgcattattacttcccttctcctcctccatggtggagctcacctgctcagacctgctg
cttcagccaatcatctctgtgtctcctaccatggacggggtcaccggggcccagcagcag
gggtttcaggttctccagggctccaatttcaccatcagctgctccgtccagcctcagtac
ccaggaggctccttccagctcaccttcacctcctccaacacagcatacaactacacccag
ccagctgtcagtcactccgctgacttcctgtttcctgctgcagaccccacccaccaagga
agctatagctgtgtttatggcgtctttgttttttctcataacttctcctctgagagccgt
ctgctctctgtcactgtcacagatccaaaaggttttatcatcagactggtcgtcgtcctg
ctggtggctctgctgctgtctaacactgccgtctatttcatcctgaaggccagcaggggg
cagaagtcagacccacaggaaaacattgagctggattattataacctgggtgtttccaga
gctgaaggagaaccgactggagaggaaggagagccggctggagaggaaggagagccggct
ggagaggaaggagagccgactggagaggaaggagagccggctggagaggaaggagctcgg
ggagcagagtag
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