Scomber japonicus (chub mackerel): 128360916
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Entry
128360916 CDS
T09718
Symbol
cul3b
Name
(RefSeq) cullin-3b isoform X1
KO
K03869
cullin 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04120
Ubiquitin mediated proteolysis
sjo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128360916 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128360916 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128360916 (cul3b)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128360916 (cul3b)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
128360916 (cul3b)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
128360916 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
RhgB_N
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
128360916
NCBI-ProteinID:
XP_053177447
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All DBs
Position
6:32751134..32781812
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AA seq
769 aa
AA seq
DB search
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLG
KHSGRQLTLQHHMGSADLNATFYGPIKKVCEDGSEVGVGGAQVTGSNTRKHILQVSTFQM
TILMLFNNREKSVFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVF
TVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQH
NILVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcagcaaaggcggcaccaagaaggacaccaagatgaggatacgggccttt
cctatgacgatggatgagaagtatgtcaacaacatctgggaccttctgaagaacgccatc
caggagattcagaggaagaacaacagcgggctgagcttcgaggagttgtacaggaacgcc
tacaccatggtgctccacaaacacggagagaagctctacacgggcctgcgggaggtcgtc
accgaacacctcatcaacaaagtacgagaagatgtcctcaactctctaaataataacttc
cttcaaaccttaaatcaggcgtggaacgaccatcaaacggcgatggtgatgatcagagac
atcctgatgtacatggaccgggtgtacgttcaacagaataacgtagagaatgtctacaac
ttgggtcttataatctttagggatcaggtcgttcgctacggctgcatcagggaccaccta
cggcaaaccctgctggacatgatcgcacgtgaaaggaagggggaggtggtggacaggggc
gccatcagaaacgcttgccaaatgttaatgatcctcggcctcgaagggagatctgtttac
gaagaagacttcgaggcgcctttcttagaaatgtctgcagaatttttccagatggagagc
caaaagttccttgcagaaaacagtgccagcgtgtacataaagaaggtggaagccaggatt
aatgaggagatcgagcgggtgatgcactgcctggataaatccacagaggagcccattgtc
aaggtggtggaaagggagctcatctccaaacacatgaagaccatcgtagagatggagaac
tcgggtctggtacacatgctcaagaatggcaagacggacgatttggcgtgtatgtacaag
ctgtttagccgggtccccaatggcttgaagaccatgtgcgagtgtatgagctcatacctg
cgggagcaaggcaaagctctcgtgtcggaggagggagaaggaaagaaccccgtagactac
atccagggtctgctggatttgaagtcccgtttcgaccgtttccttcaagaatcttttaat
aacgatcggctcttcaaacaaactattgctggcgactttgagtacttccttaacctcaac
tcgcgctcacctgagtacctctcgctctttattgatgacaagctgaagaaaggagtaaaa
gggctgacggagcaggaagtggagtctatactggacaaggccatggtgctgttccgcttc
atgcaggagaaggatgtgttcgagaggtactacaagcagcacctcgctcgcaggctgctc
accaacaagagcgtctctgatgactcggagaaaaacatgatctcaaagcttaagaccgag
tgcggctgtcagttcacatcgaaactggaaggcatgttccgggatatgagcatctccaac
accaccatggacgagtttagacaacatctacagacaactggggtgtcacttggaggagtc
gatctcactgtgagagtcttgaccacaggttactggccgacacaatcagcaacacccaag
tgcaacatccctccttcaccgcgacatgcattcgaagtctttagaaggttttatcttggt
aagcacagcggcagacaactcacactgcagcatcatatgggctctgcagatctaaacgcc
accttctacggtcccatcaaaaaggtatgtgaggatgggtcggaggtcggcgtgggaggc
gcccaggtgacgggctccaataccaggaagcacatcttacaggtctccaccttccagatg
accatcctcatgctgttcaacaacagagagaagtccgtctttgaggagatccagcaggag
acggatatcccagagagggagctggtgcgagcgctccagtcgttggcctgtgggaaaccg
actcagagagttctcaccaaagagccgaagtccaaggagatcgagaacggccacgtgttt
acagtcaacgaccagtttacctccaagctgcaccgcgtcaagatccagacagtggctgcc
aaacagggggagtcagacccagagcggaaggagacacggcagaaagtggacgacgacagg
aagcatgagatcgaagctgccatagttcgcatcatgaagtccagaaagaagatgcagcac
aacatcttagtagcagaggtcacgcagcagttgcgagcacgattcctccctagtcccgta
gtcatcaagaagcgcattgaaggactcattgagagggaatatttggcacgaacaccagag
gaccgcaaagtgtacacttacgtagcgtaa
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integrated database retrieval system
