Scomber japonicus (chub mackerel): 128360921
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Entry
128360921 CDS
T09718
Symbol
abcf3
Name
(RefSeq) ATP-binding cassette sub-family F member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sjo03012
]
128360921 (abcf3)
Translation factors [BR:
sjo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128360921 (abcf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_23
AAA_29
RsgA_GTPase
MMR_HSR1
AAA
nSTAND_NTPase5
AAA_15
AAA_28
NACHT
AAA_16
ATP-synt_ab
DUF1672
ORC-CDC6-like
DUF87
Arf
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
128360921
NCBI-ProteinID:
XP_053177452
LinkDB
All DBs
Position
6:38785866..38807541
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AA seq
711 aa
AA seq
DB search
MATYVEILKSEFPEIDSELFDYITGVLDCGGADFEDGEEVFDAIGGVLQEVSVDSKNEDD
VRDICLQMFNTLKLNNCHGAQRQVLLDAPVQLSQISVDTNSAATDIQGIWMMKRPQNTTV
DSKKLEKAEAKLKAKHERRNEKDSQKGSTPVVLEEASASQASSKKDNRVDQSGKNRSYDI
RIENFDVSFGERCLLQGAEVSLASGRRYGLIGRNGLGKTTLLKMLASRNLRVPAHISILH
VEQEVAGDETAALQSVLESDTLREGLLHEEKTLNARIANGTADGMESVRLSEIYGKLEEI
EADKAPARASVILAGLGFSPKMQQQATKEFSGGWRMRLALARALFARPDLLLLDEPTNML
DVRAILWLENYLQTWQSTILVVSHDRNFLNAVVTDIIHLHSQTLDSYRGDYENFIKTKED
RLKNQQREYEAQLQYRQHIQVFIDRFRYNANRAAQVQSKLKLLERLPELKALEKETEVTL
RFPDNFEKLSPPILQLDEVEFYYSADARLFSGLNLSADLESRICIVGENGAGKSTILKLL
MGELTPVNGIRQAHRNLKIGYFSQHHVDQLDLNVCSVELLLNKFPGRSEEEYRHQLGGYG
ITGELSTRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALAKALNKFRG
GVILVSHDERLIRMVCKELWVCDGGKVQRIDGGFDEYRDILQEQFRKEGYL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtacgtggagattttaaagagcgagtttcctgagatcgactcggagctgttc
gactacatcacaggcgtgttggactgcggtggagcagacttcgaggatggagaggaagtg
ttcgacgccatcggaggagtcctgcaggaagtgtcggttgacagtaagaacgaggacgac
gtcagagacatctgtctccagatgttcaacacactcaaactgaataactgccacggcgct
cagcggcaggtgttattggacgctccagtgcagttgtcccagatctccgtggacaccaac
tctgctgccacagacattcagggcatctggatgatgaagcgtcctcagaacacgacggtc
gattcgaagaagttggagaaggctgaagccaagctgaaggccaaacacgaacgccgcaac
gagaaggactcacagaaagggtccacgccagttgtcttggaggaggcgtcggccagtcaa
gcgagcagtaagaaagacaaccgagtcgaccaatcggggaagaatcgcagctacgacatc
cgcattgagaactttgacgtttctttcggagagaggtgtctgctgcagggggccgaggtg
tccctggcgtcgggccggcggtacggtctgatcgggcgtaacgggttggggaagacaacg
ctgctgaagatgctggccagtcgtaacctccgcgtcccggctcacatctccatcctgcac
gtggaacaggaagtggcgggagacgagacggccgcactgcagagcgtcctggagagcgac
acgctgagagaggggctgctgcacgaggagaagacgctcaacgctcgcatcgctaacgga
acagctgacggcatggagagcgtccggctgtcagagatctacggcaagctggaagagatc
gaggccgacaaagccccggcacgagcctccgtcatcttggctggtctcggattctctccc
aaaatgcaacagcaggcgacaaaggagttctcaggaggatggaggatgaggttagcgttg
gccagagctctgtttgctcggccggacctgctgctgctggacgagccgaccaacatgttg
gatgtcagagccattctgtggctggagaactacctgcagacgtggcagtccaccatctta
gtcgtctcccacgaccgaaacttcctgaacgccgtggtgaccgacatcatccacctgcac
tcccagacgctggacagttaccgtggcgactacgaaaactttattaaaaccaaagaagac
agacttaagaaccaacagagagagtacgaagcccagctgcagtacagacaacatatacag
gtttttatcgacaggtttcgatacaacgctaacagggcggctcaggtccagagcaaactg
aaacttctggagaggctgcctgagctgaaagccttggagaaagagactgaggtgacttta
aggtttccagataactttgagaagctgtctcctcccatcctgcagttggatgaagtggag
ttttattactctgcagacgctcggctcttctctggactcaacctgtcagctgacctcgag
tctcggatctgcatcgttggagaaaacggcgccggtaaaagtaccattctcaaactgctg
atgggtgagctgacacctgtcaacgggatcagacaagcgcacaggaacttgaagatcggt
tacttcagtcagcatcacgtggaccagctggacctgaacgtctgctctgtggagctgctg
ctcaacaagttccccggtcggtcagaggaggagtaccgccaccagctgggaggttacgga
atcaccggcgagctgtcgacgaggccggtggcaagtctgtcaggaggacagaagagcaga
gtggccttcgcacagatgaccatgccatgtccaaacttttacatccttgacgagccgact
aatcatctggacatggagaccatcgaggctctggccaaggcgctcaacaagttcagaggc
ggggtcatcctggtgtcccacgacgagcgtctgatccggatggtgtgtaaggagctgtgg
gtgtgtgacggcgggaaagttcagcgcatcgacggcggcttcgacgagtaccgagacatc
ctgcaggagcagttcaggaaggagggttacctgtga
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