Scomber japonicus (chub mackerel): 128360983
Help
Entry
128360983 CDS
T09718
Symbol
eprs1
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00860
Porphyrin metabolism
sjo00970
Aminoacyl-tRNA biosynthesis
sjo01100
Metabolic pathways
sjo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
128360983 (eprs1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128360983 (eprs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjo01007
]
128360983 (eprs1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128360983 (eprs1)
Enzymes [BR:
sjo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
128360983 (eprs1)
6.1.1.17 glutamate---tRNA ligase
128360983 (eprs1)
Amino acid related enzymes [BR:
sjo01007
]
Aminoacyl-tRNA synthetase
Class I (A)
128360983 (eprs1)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128360983 (eprs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
HGTP_anticodon
tRNA-synt_2b
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C
New_glue
GST_C_3
Motif
Other DBs
NCBI-GeneID:
128360983
NCBI-ProteinID:
XP_053177532
LinkDB
All DBs
Position
1:complement(9719424..9740587)
Genome browser
AA seq
1667 aa
AA seq
DB search
MALNLIINTSNPPLGALLAAEYVKGSVQLSVEEGKDTRLHVSDAVQFSDASSISRYLARV
APALGLYGANMMEQTEVDHWLEFSARRLCGQPGFTVALGELDKALSLRTFLVGHALTLAD
LSIWAALKGHGEWPSQGKSFSHVNRWFSFLSSQVPFTSVGGKYASKKAPVKKSSSEEEKK
KDVGKFVDLPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDDTNP
EKEKEDFEKVILEDVSMLQIHPDQFTYTSDHFPIIMKFAEQLLTEGKAYIDNTPPEQMKQ
EREQRTESKCRNNTVEQNMKMWSEMKSGTEFGQTCCMRAKIDMSSNNGCMRDPTLYRCKN
TPHPRTGSTYRVYPTYDFACPIVDSLESVTHALRTTEYHDRDEQFYWIIDALRLRKPYIW
EYARLNLNNTVLSKRKLTWFVDQGYVEGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGGS
RSVVNMEWDKIWAFNKKVIDPVAPRYTALSSSYVVPVSVPEATEEMKEVVKHPKNTDVGM
KEVWYGPRVLVEGADAETFSEGEMVTFINWGNLIITKINKGANGKVLSMEARLNLDNKDY
KKTTKITWLAETGTAPLLPTVCINYQPLISKAVITKDDDFKDYINKNSKLEEKMLGDPCL
KTLKKGDIIQLQRRGFYICDQPYEPVSPNSCKESPCILIYIPDGHTKEMPTAGSKDKTKS
QAPSKTPASAAKAAKATKAAPTSAPAPASTSTGDVFSSIVAQGEAVHQLKTAKAPKEEVD
KAVQQLLSLKAQFKQQTGMDYKPGMTPPTSAPAPPASSSDSASCPFTRVAEQGELVRKLK
AEKAPKDQVDAAVKQLLALKAEFKKLTGQDYKPGMAPTTPASPATTTTTTTTTTTTSSSS
NSSSGLYERVSQQGEVVRKLKSEKAPKDQVDAAVKQLLALKAEYKQATGQDYKPGAAPVQ
NTAAPAPAKSSPSSAPAATGIYEKVAEQGEMVRKLKTEKAPKDQVDAAVKQLLALKAEYK
QQTGKDYKPGLQTPASPAKTQSSSASTQSSSPPQAQELFSQVSQQGDLVRKLKSEKAPKD
QVDGAVKTLLELKNKYKSLTGQEYKPVAAAGAAGGEDKNRKERENKSEKQGGGGGGKKGK
GDKGGQGKESSGGAGGAGEGQGPKKQTRLGLEAKKEENLADWYSQVITKAEMIEYYDVSG
CYVLRPWSFAIWESIKDFFDREIKKLGVENCYFPMFVSQAALEKEKSHIEDFAPEVAWVT
RSGKTELAEPIAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTR
EFLWQEGHTAFATKEEATEEVMQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYTTTV
EAFISASGRAIQGATSHHLGQNFSKMFEIVFEDPKKPGEKQLAYQNSWGITTRTIGVLTM
VHGDNMGLVLPPRVACLQIVIIPCGITASLPEQDKEALMAQCSKYLSRLLEAGVRVKTDL
RDNYSPGWKFNHWELKGVPIRLEVGPKDMQQRQFVAVRRDTGEKVTIPEAEAEKRMLTML
EDIQNSMFNKASNDLNTHMVVADTMEQFQKDLDQGKIVQIPFCGGIECEDWIKKTTAKDQ
DLEPGAPSMGAKSLCIPFSPLKNLQPGQKCVSGKEDAQYYTLFGRSY
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaacctcatcatcaacacaagcaatccgcctctaggagcgctcctggcagca
gagtatgtgaaggggagcgtgcagctgtcagtagaggaaggcaaagacacccggctccac
gtctcagatgcagtccagttcagtgatgccagttctatcagtcgctacctggcccgtgtg
gctcccgccctcggcctctatggagccaacatgatggagcagactgaggtggaccactgg
ttggagttcagtgcacggcgtctgtgtggtcagcctggtttcactgtggcactgggtgaa
ctggataaagccctttccctgcgcaccttcctggtcggacatgccctcaccctggctgat
ctgtccatctgggccgccctcaaaggtcatggcgaatggcccagccagggcaaatccttc
tctcacgtcaaccgctggttctctttcttgagctcacaagttcccttcacttctgtgggt
ggcaagtacgcctccaagaaagctccagtaaaaaaatccagttctgaggaggagaagaag
aaggatgttggcaagtttgtggatttgccaggagctgagatgggcaaagtggtggttcga
ttccctcctgaagccagcggatatctgcatatcggccatgccaaggctgctctgctcaac
cagcactaccaggtcacatttaaaggcaagctcatcatgcgctttgatgacaccaaccct
gagaaggaaaaggaggactttgagaaggtgatcctggaagacgtctctatgctccagatc
catccagaccagttcacctacaccagcgaccatttccccatcatcatgaaattcgcagag
cagcttctcacagagggcaaggcctacatcgacaacacgcctccagagcagatgaagcag
gagagggagcagcgtaccgagtccaaatgcagaaataacaccgtggaacagaacatgaag
atgtggtcggagatgaaatccggtacagagttcgggcagacctgctgcatgagagccaag
attgacatgagctccaacaacggctgcatgagagaccccaccctctaccgttgcaagaac
accccccaccctcgcacaggaagcacatacagagtttacccaacgtatgacttcgcctgc
cccatcgtggacagtttggagagtgtgacacacgctctgaggaccacagagtaccacgat
cgcgacgagcagttctactggataatcgacgccctgcgcctcaggaagccctacatttgg
gagtacgcccgcctcaacctcaacaacacagtgctgtccaagaggaagctcacctggttt
gtcgaccaaggatacgtcgagggatgggatgaccctcgcttccccaccgtcagaggagtg
ctgaggagaggaatgactgtggagggtctcaaacagttcatagctgctcagggtggatca
aggtcagtggttaacatggagtgggacaagatctgggccttcaacaagaaggttatcgac
cccgtcgcccccagatacacagctctgtccagctcctatgtggttcctgtttctgtccca
gaggctacagaggagatgaaggaagtggtcaaacaccctaagaacacagatgtgggcatg
aaagaggtttggtatggaccccgggttctggtggagggagcggatgctgagacgttctca
gagggagagatggtcaccttcatcaactggggcaacctcatcatcaccaagataaacaaa
ggcgccaacggcaaggttctgtccatggaggctcgtctgaacctagacaacaaagactac
aaaaagaccacgaagatcacttggcttgccgaaacgggcacagcacccctgctgcccacc
gtgtgcatcaactaccagcccctcatctctaaagccgtcatcaccaaagacgacgacttc
aaagactacatcaataaaaacagcaagttggaggaaaagatgctcggagatccctgtctg
aagaccctgaagaaaggtgacatcattcagctccagaggcgaggcttctacatctgtgac
cagccctatgagcctgtcagccccaacagctgtaaggagagtccctgtatcctgatctac
attcctgatggtcacactaaggagatgccgactgccggatctaaggacaagaccaagagt
caggcccccagcaaaacgcctgcctccgctgccaaagctgccaaggctaccaaagctgcc
ccaacctcagccccagcacctgcctcaacctcaaccggtgacgtgttctcaagcatcgta
gctcagggtgaagccgtccaccagctgaagactgccaaagctccaaaagaagaagtggac
aaagcggttcagcagctgctttctctaaaggctcagtttaagcagcagacaggtatggac
tacaagccaggcatgactcctcccacctccgccccagctccacccgcctcatcatctgat
tccgcctcctgcccattcacccgcgtagctgagcagggcgagctggtcaggaagctgaag
gcagagaaagcacccaaggaccaggttgatgcagcggtgaagcagcttctcgctctcaag
gcggagtttaaaaagctgactggtcaggattacaaaccagggatggccccgaccactccc
gcctcccctgcgaccaccaccacaactaccaccaccactaccaccacctcctcctcctcc
aactcttcttcaggcctgtacgagcgcgtttcacagcagggagaggttgtgaggaaactg
aagtctgaaaaagcccccaaggaccaggttgacgctgcagtcaaacagctgctcgcactt
aaggcagagtacaagcaggccaccggccaggactacaaaccaggagcagcaccagtccag
aacaccgcagctccagctcctgccaagagcagccccagctctgcccccgctgccaccggc
atctacgagaaggttgccgagcagggagaaatggtcaggaagctgaagactgaaaaagcc
cctaaggatcaggtagatgcagcagtgaagcagttgttggctctaaaggcagagtacaaa
cagcagaccggaaaggattacaaaccagggttacagacaccagctagccctgcaaagacc
cagtccagctctgcctcaacccagtctagctctcccccgcaagcccaggagctgttctcc
caggtttcccaacagggagatctggtgagaaagttaaagtctgagaaagctcccaaggac
caggtggatggtgcagtgaagactctactggaactgaagaacaagtacaagtcgctcacc
ggacaggagtacaaaccagtggctgctgccggagccgctggaggagaggacaaaaaccgc
aaggagagggagaataagtctgagaaacaaggaggaggaggaggagggaagaaggggaaa
ggagacaaaggcggccagggcaaggagtcttctggaggagcaggaggagcaggagagggt
caaggacctaagaaacaaacacggttgggactggaagccaagaaagaggaaaacctggct
gactggtactctcaggttatcactaaagctgagatgattgagtactacgatgtcagcggt
tgctacgtgctacggccctggtccttcgctatctgggaatccattaaagactttttcgac
cgggagattaagaaactgggagtggagaactgctacttccctatgttcgtttctcaggcc
gctctagagaaggaaaagtcccatattgaagattttgctccagaggttgcctgggtgacc
cggtcagggaagaccgagctggcagagcctattgcagtcagacccaccagtgagacagtg
atgtacccagcctacgccaaatgggtgcagtcccacagagacctgccaatcaaactcaac
cagtggtgtaacgttgtgagatgggagttcaaacacccgcagcccttcctgaggacaaga
gagttcctctggcaggagggacacacagcttttgctacgaaagaggaagcaactgaggag
gtgatgcagatactcgacctgtacgccagagtgtatgaagagctgatggccatccccgtg
gtgaagggaaggaagacagagaaggagaagttcgcaggaggagattacaccaccactgta
gaggcgttcatctccgccagcggcagagccattcagggtgctacatcccaccatctgggt
cagaacttctctaagatgttcgagattgtgtttgaggatcctaagaagcctggcgagaag
caactggcttaccagaactcctggggtatcacaaccaggaccatcggtgtcctcaccatg
gtccacggagacaacatgggactcgtactgccacccagagtagcctgcctgcagattgtc
atcatcccatgtggcatcacagcgtctttgccagagcaggacaaggaggcactgatggcc
cagtgctccaaatacctgagcaggctgctggaggctggtgtcagagtgaagactgacctc
agggacaactactccccaggatggaagttcaaccactgggaactcaagggcgttcccatc
cgtctggaagtgggtcccaaggatatgcagcagcgtcagtttgtcgcagtgaggagagac
acaggcgagaaggtgactattccagaggccgaggcagagaagaggatgctcaccatgttg
gaggacatccagaacagcatgttcaataaagcttcaaatgacctgaacactcacatggtg
gtagcagacactatggaacagttccagaaggatctggatcagggcaagatcgtccagatc
ccgttctgtggaggaattgagtgcgaggattggatcaagaaaaccactgccaaggaccag
gacctggagcctggagcgccatctatgggagctaagagtctctgtatccccttctcaccc
ctgaagaatctgcagcctggtcagaagtgtgtcagcggcaaggaagacgcacagtattac
accctgtttggacgcagctactaa
DBGET
integrated database retrieval system
