Scomber japonicus (chub mackerel): 128361270
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Entry
128361270 CDS
T09718
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128361270 (si:dkey-183n20.15)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128361270 (si:dkey-183n20.15)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128361270 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_2
TRAF3_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
128361270
NCBI-ProteinID:
XP_053177629
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All DBs
Position
7:complement(11553426..11558206)
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AA seq
254 aa
AA seq
DB search
MHPHHSSQSRLDHLPSEGLVGQCHPGSSSSLVCQSEQSASAYMSCHKLCPSTSQQEWHCP
VCLQTARFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCRQKVSVLCHLFNESRSDRQ
SKEVLGEITDYNKRYSGAPRRVTDYLCDAPLLLQLLARGLGTIGGLVWLFFFRVALCCVG
TVVSISSPSLDSVSSSSNPLETDPSLCGLLGALDDLVVVILLLICVININQQMAPERGHN
ANAATSQGVMGDSL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcacccccaccacagctctcagtccagactagaccatctaccttctgaaggtctcgtg
ggtcagtgtcacccagggtcatcaagttctttggtttgtcaatcggagcagtcagcatca
gcatacatgagctgccacaagttatgtccatccacaagccaacaggaatggcactgtcct
gtgtgtctgcagacagccaggttcccagtccagacaaactgtggccatttgttctgtgct
ccttgtttgatcgcctactggagacatgggtcatggttggacgctatcagctgccctctc
tgtagacagaaggtcagcgtgctgtgccatctatttaatgagagtcgatctgaccgacaa
tcaaaggaagttcttggagaaatcacagattacaacaaacgttattctggagccccaaga
cgggtaacagactacctgtgcgatgcgccccttctcctgcagttactggcacgtggcctg
ggtaccattggagggcttgtgtggctgtttttcttcagggtggcgctgtgctgtgtgggg
actgtggtgtccatctcctccccttctctcgactccgtctcctcatcgtcaaacccccta
gaaacagacccctccctctgcggactgctgggggccctggatgacttggttgtggtcatt
ctgctccttatctgtgttatcaatatcaaccagcaaatggcgccagagagaggacacaat
gcaaatgctgcaacctcacaaggagtaatgggggattcactctag
DBGET
integrated database retrieval system
