Scomber japonicus (chub mackerel): 128361286
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Entry
128361286 CDS
T09718
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128361286 (sox2)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128361286 (sox2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128361286
NCBI-ProteinID:
XP_053177661
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All DBs
Position
7:complement(28297845..28298813)
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AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPSQMQSMHRYDMSALQYNTMTSSQSYMNGSPTYSMSYSQQTTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQTAQTRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaacttaagccccctgctccccagaccaacacggggggc
acgggcaacaccaacacgtccggcaccggccccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccaaaggaggaagatggcgcaa
gaaaatcccaaaatgcacaactcggagataagcaagagactgggcgccgagtggaaactt
ctgtcggagagcgagaagagacctttcatcgacgaagccaagaggctccgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttacccggcgggctcctggctcccggaggcaacgggatgggaacc
ggggtcggtgtaggggtgggggccgggctgggcggtggggtgaaccagcggatggacagt
tatgcggcgcacatgaacggctggaccaacgggggttacggcatgatgcaggaccagctg
agctaccagcacccgggactgaatgcgcacaacccgagccagatgcagtccatgcaccgt
tacgacatgagcgccctgcagtataacaccatgaccagctcccagagctacatgaacggc
tccccgacctactccatgtcctattcccagcaaaccacgccggggatgaccgcgctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagccctcccgtcgtc
acctcgtcctctcaccgtgctgccccgggctgccaaagcggagatctgagggacatgatc
agcatgtacctgcccggggcggaggtgagcgagcagaccgcccagaccaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgcctttaaca
cacatgtaa
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integrated database retrieval system
