Scomber japonicus (chub mackerel): 128361440
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Entry
128361440 CDS
T09718
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128361440 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128361440 (tmco1)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
128361440 (tmco1)
Transporters [BR:
sjo02000
]
Other transporters
Pores ion channels [TC:
1
]
128361440 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6809
DUF5683
Exonuc_VII_L
Vpu
DSHCT
Nucleoside_tran
Piezo_TM1-24
SLC52_ribofla_tr
DLH
Myc_target_1
Peptidase_S49_N
DUF4257
DivIC
ATG14
Motif
Other DBs
NCBI-GeneID:
128361440
NCBI-ProteinID:
XP_053177878
LinkDB
All DBs
Position
7:6416647..6420657
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AA seq
188 aa
AA seq
DB search
MSTMFADTILIVFISVCTALLAEGITWVLVYRTEKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT
PLSYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgtttgcagacaccattctcatcgttttcatctctgtgtgcacagcgctg
ttagccgaaggcatcacctgggtgttggtgtatcgcactgaaaagtacaagaggctaaag
gctgaggtagaaaaacaaagcaaaaaacttgagaagaaaaaggaaaccatcacagaatct
gcaggacgtcaacagaagaagaagatcgaaagacaggaagagaagctgaagaacaacaac
agagacctgtctatggtgcgcatgaagtccatgtttgccattggcttctgcttcacagct
ttgatgggcatgttcaactccatttttgatggaagagttgtggccaagttgccgttcacg
ccgctgtcttacatccagggactgtcacatcgcaacctgctgggcgaggattacaccgac
tgctcctttatcttcctctacatcctctgcaccatgtctatcagacagaacattcagaag
atgctcggtctggcaccttccagagctgcaacaaaacaggctggaggcttcctgggaccc
cctcctcaggcagctaagttctcttaa
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