Scomber japonicus (chub mackerel): 128361472
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Entry
128361472 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128361472
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Gene silencing
Transposable elements
128361472
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GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
Motif
Other DBs
NCBI-GeneID:
128361472
NCBI-ProteinID:
XP_053177923
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All DBs
Position
1:complement(1886923..1888907)
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AA seq
311 aa
AA seq
DB search
MACPFLDEPVDVEAQILRRNLRRERIIRPRLDVLSFPDEYLFERFRFSSTSIIYSNNILS
XRGHALSSEQILCIALCFFANGSFLYNIGDAEHVSKATVCRAVRNVTLALKRLLYMLVVF
PGHRPTRLLKEEFHRIAGFPGVIGCIDGTQIPIIAPSMNEGDYVNRRSVHSINVQIICDA
AHMISNVEAKWPGSAHDSRVFRESLYREFDGYLLGDRGYPCQRYLLTPYPDPEPGPQQHY
NLAHCRTRARVEMSIGMLKARFQCLRRLRVTPERACDIIVACVVLHNIATIRREQWSYRN
INVEFHSAMSL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtccctttctagatgagccagttgacgtcgaggcgcagatactccgtcgaaat
ctccgtcgggagaggatcattagaccacgattagacgtgttatcatttcctgatgagtac
ctttttgagcgtttccgtttctcttcaacatcaattatttattcaaacaacattctcagc
nntcgtggacacgctctcagttctgaacaaattctttgcattgcactttgtttttttgcc
aacggcagttttttatacaacatcggtgatgcggagcatgtctctaaggcaactgtctgt
cgggcggtccgaaatgtgacactggcattgaaacggctactgtacatgttggtagttttt
ccaggtcacagacctaccagacttctcaaggaagagttccacagaattgcagggtttcca
ggtgtgattggctgcattgatggcactcaaattccgatcatagctccttcaatgaatgaa
ggagattatgtgaatcggagatctgtccacagcattaatgtacagatcatatgtgatgca
gcccacatgataagtaatgtggaagcgaagtggcctgggtctgcgcatgactcacgagtg
tttcgtgagtctttatatagagagttcgatggttacctacttggagacagagggtacccc
tgccagcgctacctgctgaccccttaccctgaccctgagcctggcccacagcaacattac
aacttggctcactgcaggacacgagccagagtagagatgagcattgggatgctcaaggcc
cggttccaatgccttcgtaggctcagggtcaccccagaaagagcatgtgacattatagtg
gcatgcgtggtactccacaacattgcaacgattaggagagaacaatggagctataggaac
ataaatgtagaatttcacagtgccatgtcattgtaa
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