Scomber japonicus (chub mackerel): 128361476
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Entry
128361476 CDS
T09718
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04110
Cell cycle
sjo04120
Ubiquitin mediated proteolysis
sjo04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128361476
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128361476
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
128361476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128361476
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
128361476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_SCAP
ELYS-bb
Ge1_WD40
Beta-prop_VPS8
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
128361476
NCBI-ProteinID:
XP_053177924
LinkDB
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Position
7:complement(16839080..16844704)
Genome browser
AA seq
495 aa
AA seq
DB search
MDPESEHRLLRQINIQNDNLSPVKMTQSLCCRRPSGSPLTSPSKFGDRFIPTRAGANWNI
NFHRINENEKSPSQNRKTKDASSDNIKADGLAYSALLKNELLGAGIEKIQDPQTEDRRLQ
PSTPEKRSLFSYSLNTKRSSPDEGINISPYSLSPVSIKSQKLLRSPRKPTRKISKIPFKV
LDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWS
ERGNLVAVGTHKGYVQIWDAGAGKKLFSLEGHTARVGALAWNADQLSSGSRDRMILQRDV
RTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQVYMDHLAAV
KAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPLQCMDTGSQVCNLAWSKHANELVSTH
GYSQNQILVWKYPALTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRS
TKESVSVLNLFTRIR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgaatctgaacatcgccttctacgtcaaatcaacattcaaaatgacaacttg
agccctgttaaaatgacacagagtctgtgttgtcggagacccagcggctcaccattaact
tcacccagtaagtttggagacagattcatcccgaccagagcaggggccaactggaatatc
aacttccacaggatcaatgaaaatgagaagtcaccaagtcaaaacagaaagacaaaggat
gcttcttctgataatatcaaagcagatgggctggcctactctgccttattgaagaatgag
ctgctaggagcaggaatagaaaagatccaggatccgcagacagaggacagacgtctacag
ccttcgacccctgagaagaggagtcttttctcttactcacttaatacaaaaaggtcatca
ccagacgaaggcatcaacatctccccctactctctatcacctgtcagcatcaaaagtcag
aagttgttgcgttcaccaagaaagccaactcggaagatctccaagataccctttaaagtc
ttggatgctccagagctgcaggatgacttttaccttaatttggtggactggtcatctctc
aacgtgctcagtgtcggcctgggcacatgtgtttacctgtggagtgcctgcaccagccag
gtaacaaggctatgtgatctatcagtggagggagactcagtcacatcagttgggtggtct
gaaaggggtaacctggtagcagtggggacgcacaaaggctacgttcagatctgggatgcg
ggtgctgggaagaaactcttttctctggaaggacacacggccagagttggagcattagcc
tggaatgcagaccagttgtcttcagggagccgtgatcgtatgattcttcaaagagatgta
cggactcccccactacagtcagagagacggctacagggacataggcaggaagtgtgtggc
ttgaagtggagcactgaccatcagctgctcgcctctggtggcaacgacaataagctgctg
gtgtggaaccattcctcactgagcccagtgcaagtatacatggatcacctggctgcagtg
aaagccattgcctggtctccccaccaacatggcctgctcgcctctgggggcggcactgct
gaccgctgcattcgattttggaacaccctgacgtctcagccactgcaatgtatggacacc
ggctcacaggtctgcaacctggcctggtccaagcatgctaatgagctggtgagcacccat
ggctactctcagaaccagatcttggtgtggaaatatccagcgctcacccaagtagccaaa
ctcacaggtcactcctacagagtgctctacttggccatgtccccggacggtgaggcgatc
gtcacaggagctggagacgagacgctgcgtttctggaatgtgttcagtaaaacaaggtca
acaaaggaatctgtatcggttctaaatctctttaccaggatacggtga
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