KEGG   Scomber japonicus (chub mackerel): 128361571
Entry
128361571         CDS       T09718                                 
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03010  Ribosome
sjo04120  Ubiquitin mediated proteolysis
sjo04137  Mitophagy - animal
sjo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    128361571 (uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128361571 (uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128361571 (uba52)
   04137 Mitophagy - animal
    128361571 (uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sjo03011]
    128361571 (uba52)
   04121 Ubiquitin system [BR:sjo04121]
    128361571 (uba52)
Ribosome [BR:sjo03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    128361571 (uba52)
  Archaea
    128361571 (uba52)
Ubiquitin system [BR:sjo04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   128361571 (uba52)
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 zf-C4pol OTU1_UBXL Dsc3_N
Other DBs
NCBI-GeneID: 128361571
NCBI-ProteinID: XP_053178051
LinkDB
Position
7:complement(23407598..23409849)
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagactttgacggggaagaccatcaccctcgaggttgagcccagc
gacactatcgaaaatgtcaaggctaagatccaggataaggaaggaattccccctgatcag
cagcgtctgattttcgccggcaaacagctggaggatgggcgcacactttctgactacaac
atccagaaagaatccacactgcatctggtcctccgtctgcgtggtggcatcatcgagcct
tctctgagacagctggcccagaagtacaactgcgacaagatgatctgccgcaagtgctat
gcccgtctgcacccacgtgctgttaactgccgcaagaagaagtgtggacacaccaacaac
ctgcgccccaagaagaagctgaagtag

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