Scomber japonicus (chub mackerel): 128361595
Help
Entry
128361595 CDS
T09718
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128361595 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128361595 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128361595 (her6)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128361595 (her6)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128361595 (her6)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
128361595 (her6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
128361595
NCBI-ProteinID:
XP_053178087
LinkDB
All DBs
Position
7:19890213..19892004
Genome browser
AA seq
277 aa
AA seq
DB search
MPADMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQLPSTAGPTHPSFGQSM
VQIPSSPPQVLPMNAVPCKGGSSPTSLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANSVSTPVPVPAAVSPGAPSGNSDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatgatggaaaaaacctcatcctctccggttgctgcaaccccggcaagc
atgaacacgactcctgataaacccaagacagcttctgagcacagaaagtcatccaagcca
attatggaaaagaggagaagagccagaatcaacgaaagcttgggacagctgaaaaccctc
atcctggatgcgctcaaaaaagatagctccagacactccaaactggagaaggcggacatc
ctggagatgacggtgaagcatctgcggaacctccagagggctcagatgaccgctgcgcta
aataccgatcccacagtcttgggaaaataccgtgccggtttcagcgagtgcatgaatgaa
gtcacccggttcctctccacctgcgaaggtgtcaataccgaggtcaggacgcggctgctc
ggccaccttgccaactgcatgacccagatcaacgccatgaactaccccagccagcatcag
caccaacaccagctcccctccaccgccgggccaacccacccctccttcggccagtccatg
gtgcagatccccagctcacctccgcaggtcctgcccatgaacgcggtaccctgtaaaggg
ggatcctcgccgaccagtttaccctcagacgccaccaaagtgtacggcggtttccaaatt
gtgcctgccacagacggacagtttgctttcctcatacccaatgcagcatttgcgccaaac
ggccccgttattcctgtgtacgccaacagcgtcagcacgccggtccctgtgccggctgcg
gtttctcccggagccccgtcaggcaactcggattcagtgtggcgaccctggtga
DBGET
integrated database retrieval system