Scomber japonicus (chub mackerel): 128361611
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Entry
128361611 CDS
T09718
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128361611 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128361611 (hnrnpm)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
hnRNP proteins
128361611 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
Lipoprotein_18
DUF7552
HnRNP_M_NLS
Motif
Other DBs
NCBI-GeneID:
128361611
NCBI-ProteinID:
XP_053178108
LinkDB
All DBs
Position
7:complement(17928243..17935608)
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AA seq
693 aa
AA seq
DB search
MSNEQVENTTEKASTQPPPPQQQQQQQQQQQQEVNGKAKHESASSRKERPQKRGGGGRYE
PYGNVNKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTE
ELMKKAVEKVNKHNLNGRPLKVKEDPDGVIAQREINKGQGGGGPPGGHGGMGGMGGMDRM
NMDRMGPGPNGPIVNIPPSLMSNPNIPNEIIHGLQAGRIGSTVFVANLDYKVGWKKLKEV
FGMAGMVVRADILEDKDGKSRGMGTVTFDMPLEAVQAVSMFNGQLLFNRVMHVKLDEKSL
PKDFGPPDRAAALPRGLSGVGLGLGPGGQPIDAAQLNRGGAAGGGMGNMGPGGMDGMGFG
GNMGGRMGGGMENFGGMNNMERYGSSGMGRMNEMDRGIGGAFDREFGRNEMGMSRNNFGD
SFERGMGNSLGMDRMSSGMDRLGASMDRMAGMDRMGMDRMDRVSDLDRLGSGFDRMGSGM
DRLGPSMDRLGPSLERMSSSMDRLGPAGFDRLGQSGLDRMGAGLDFSSPMGMDRMGNSGL
DRMASSFDRMGSAGGLDRFPSGGLDRMSSGMDRMGSGGVGQFDRSADLDRGFGGNSFGGT
GAGGPGTGGGNVRKGCQIFVRNLPFDFTWKMLKDTFNTCGMVQYADIKMENGKSKGCGVV
RFDNPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgagcaggtcgaaaacaccaccgaaaaagcaagcacacagccgccaccgccg
cagcagcagcaacaacaacaacaacagcagcagcaggaggtgaatgggaaagccaagcat
gagtctgcctccagcagaaaggagaggccccagaagagaggtggaggggggcgctatgaa
ccttatggcaacgtgaacaaaagataccgtgtctttgtcagcaacatcccatatgatgtg
aaatggcaagccctcaaagacttgatgaaagaaaaagtgggtgaggtaacgtacgtggaa
cacttaatggacgcagaaggcaaatcgaggggttgtgctgttgttgagtttaggactgaa
gagctaatgaagaaagcagtggagaaggtcaacaagcacaatctcaatggacgacccctg
aaagttaaagaggaccctgatggtgtcattgctcagagggaaatcaacaaagggcaaggg
ggcggaggccctccaggggggcatggaggaatgggaggtatgggtggaatggatcgtatg
aacatggataggatgggccctggaccaaatggccccattgtcaatatccctcctagtctg
atgagcaaccccaacatccccaatgagatcatccatggtctgcaggctggcaggattggc
agcactgtctttgttgctaatcttgactacaaagttggctggaagaagctcaaagaagtg
ttcggcatggcaggcatggtggttagggctgacattcttgaggacaaggatggaaagagc
agaggcatgggaacagtaacattcgatatgccccttgaagctgtccaagctgtctccatg
ttcaatgggcagctgttgttcaacagggtcatgcatgtcaaactggatgagaagtccttg
cccaaggattttggaccaccagacagagcagctgctcttccccgtggcctgagtggtgtt
ggtttgggattggggcctggtggccagcccattgatgctgcacaacttaacaggggtggg
gctgcaggtggtggaatgggcaacatgggccccggaggaatggatggaatgggcttcggt
ggcaacatgggaggccgtatgggaggaggaatggagaactttggaggaatgaacaacatg
gaacgttatggttcttcagggatgggcagaatgaatgagatggaccgtgggattggtggt
gcttttgacagggagtttggtcgaaatgaaatgggcatgtctcgcaataattttggagac
tcatttgaaagaggaatgggaaactctctgggtatggaccgcatgagttccggaatggac
cgcctgggagcaagtatggatcgcatggcagggatggatcggatggggatggacagaatg
gaccgtgtgtctgatctggacagactgggttctgggtttgaccgaatgggctcagggatg
gaccggctgggacccagtatggacaggcttggaccaagcctggaacgtatgagttccagc
atggaccgcctaggccctgctgggtttgaccgcttgggccagtctggtttggaccgcatg
ggtgctggtctggactttagctccccaatgggtatggatcgcatgggcaacagtgggctt
gacagaatggccagcagctttgaccgcatgggctccgccggagggctcgaccgcttccct
tctggtggcctcgaccgcatgagctctggaatggaccggatgggatctggaggtgttggt
cagtttgatcgttctgcagacttggatcgtggatttggtggcaattcctttggaggaact
ggagctggagggcctggaactggaggaggcaatgtcaggaagggatgccaaatttttgtc
agaaatctgccctttgacttcacctggaagatgctgaaggatactttcaatacttgcggc
atggttcagtatgctgatattaagatggagaacggcaagtccaaaggctgtggtgtagtt
cgctttgacaaccctgaaaccgctgagcgtgcctgccggaccatgaatggctatcggctg
aatggaagagagattgatgttaggattgataggaatgcataa
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