Scomber japonicus (chub mackerel): 128361617
Help
Entry
128361617 CDS
T09718
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00310
Lysine degradation
sjo00514
Other types of O-glycan biosynthesis
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128361617 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128361617 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128361617 (colgalt2b)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128361617 (colgalt2b)
Glycosyltransferases [BR:
sjo01003
]
O-Glycan biosynthesis
O-linked Gal type
128361617 (colgalt2b)
BRITE hierarchy
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
128361617
NCBI-ProteinID:
XP_053178113
LinkDB
All DBs
Position
7:13865570..13873591
Genome browser
AA seq
504 aa
AA seq
DB search
MEEPKSYTDEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFVDSDNLLTNPHVLKL
MMAENLTLVAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFPVPMVHSTFL
LDLRRESSKDLTFYPPHPDYSWAFDDIMVFAFSARQAGVQMYVCNREHYGFLPVPLKAQQ
NVEDESESFIHTITEALIDHDIEPTKHLYSPPSTDDTITFDEILLINLKRRLERRTRMLK
TMASLGLHAKLIDAVDGKALNSSQLQGLGIDMMPGYKDPYSGRVLTRGEIGCFLSHHSVW
TRVVEHGLQKILVLEDDVRFEPRFKRRFQAIMDDIDKAQLKWDLIYVGRKRMQVQQPEQS
VDGVNNLVEADYSYWTLGYALSQQGARKLLAAEPLKMMMPVDEFLPIMFNKHPNVEYMSY
FEPRDLKAFSVEPLLIYPTHYTGEPGYISDTETSTIWDDEAVATDWDRQHARKTAQQGRI
RPVAQNSVTGDSPPPAARASRDEL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccaaagtcctatacagatgagtggggtccaaagcattggcctccctccagg
ttcaaccatgtgatgaagctgagacaggcagcactgaaggctgccagagaacgatgggct
gactacatactgtttgttgacagtgataacctgctgacgaatccccatgtgctgaaactg
atgatggctgaaaatttgaccctggtggctcccatgttggagtctcgttctctttactcc
aacttctggtgtggcatcaccccacagggttactataagcgaacccccgactatcagcca
atcagagagtggaagcggcttggctgcttccctgttcccatggtgcacagcaccttccta
ttagacctgcgtcgtgaatccagcaaggacctgaccttctatccccctcaccctgactac
agctgggcatttgatgacataatggtgtttgctttctcagcacgtcaagcaggtgtccag
atgtatgtgtgtaacagagagcactatggtttccttcctgtccctctcaaggctcagcaa
aatgttgaagatgaaagcgagagtttcatacacaccatcacggaggctttgattgaccac
gacattgagcctacaaagcacctgtactctccaccatcaacggatgacacaatcaccttt
gatgaaatccttctgataaacctgaagcgtcggctggagagaagaaccaggatgttgaaa
acaatggcctcactgggtctacatgccaagctgatagacgcagtggacggcaaggctctg
aattcatcccagctgcaggggctgggaatagacatgatgccgggctataaggacccttac
tctggtcgagtcctgaccagaggggagatcggctgcttcctcagccatcactccgtatgg
acacgggtggtggagcatggccttcagaagattcttgttttagaggacgacgtgaggttt
gagcccaggtttaaacggcggttccaggccatcatggatgacatagacaaagcccagctg
aaatgggacctcatctacgtggggcgtaaacgtatgcaggtacagcagccggagcaatcg
gtagatggtgtaaacaacctggttgaagctgactactcctactggacgctcggctacgcg
ctgtcacagcagggagccagaaagctactggctgccgaacccttaaaaatgatgatgcct
gttgatgagttcctgcccatcatgttcaacaaacatcccaatgttgaatacatgtcttac
tttgagccacgagacctgaaggccttctccgtggagccactgctcatctatcccacccac
tacaccggggagccgggctacatcagcgacacagagacctccaccatctgggacgacgag
gccgtggccacagactgggaccggcagcacgcccgcaagacagcccagcagggtcgcatt
cgccctgtggcacagaacagtgtcactggagactcgccgccgccagctgctcgggcttcg
cgggatgaactctga
DBGET
integrated database retrieval system
