Scomber japonicus (chub mackerel): 128361720
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Entry
128361720 CDS
T09718
Symbol
onecut3a
Name
(RefSeq) hepatocyte nuclear factor 6
KO
K24171
one cut domain family member 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128361720 (onecut3a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
128361720 (onecut3a)
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Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128361720
NCBI-ProteinID:
XP_053178238
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Position
7:13301255..13317246
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AA seq
443 aa
AA seq
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MELTMENIGNLHGVSHSHQTSDLMNSPHARQSSASHRNLVSHGRSAMVSSMASILEGAGD
YRTDHALSGPLHPAMTMSCDSGMSLSSTYTTLTPLQHLPPISTVSEKFHHPHPHAHHHPA
HQRLAAGNVSGSFTLMRDDRSLASMSNLYGHYPKDMSGMGQSLSPLSNGLGSLHSSQQTL
SAYGPGAHLSNDKMLSSGGFDSHAAMLSRGEEHLARGLGGHGAGLMTSLNGIHHHSHPHS
QANGSMLSDRDRQTVVGGGQGNGSGQVEEINTKEVAQRITAELKRYSIPQAIFAQRILCR
SQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEQHKDRN
TAPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQITISQQLGLELSTVSNFFMNARRRCVD
RWHDDHGTSPGQPGTSATTFSKA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagcttacaatggaaaacattggaaatctgcacggtgtatctcactcccatcaaacg
agcgacttaatgaactccccgcacgcgcgccagtcgtcggcgtcgcatcggaacttggtg
tcgcacggacggtcagccatggtgtccagcatggcctcgatactggagggagcaggggac
taccgcacagaccacgctttgtctggccccttgcatccggcaatgaccatgtcgtgcgac
tccgggatgagcctgagcagcacctacacaacgctgacgccgctgcagcacctgcccccc
atatccaccgtttcggagaaatttcaccatccacacccacatgctcaccatcatccggct
caccagcgacttgcggccgggaatgtcagcggcagcttcaccctgatgagggatgaccga
agcctcgcctccatgagtaacctctacggccactaccccaaagatatgtccggcatgggg
cagtctctgtcccccctatccaacggtcttgggtctttgcacagctcccagcagactctc
agcgcctacggtcctggagctcacctctccaacgacaagatgctctcctcggggggcttc
gattcccacgcggccatgctgtcccggggcgaggagcacctggcccggggtcttgggggt
cacggggccgggctcatgacatccttgaacggcatacaccatcacagccatccgcactct
caggcaaacgggtccatgctatcagaccgggacaggcagacagtggtgggaggcgggcag
ggaaatgggtcaggacaggtggaggagataaacaccaaggaggtggcacagcgaataacg
gcagagctaaagcgctacagcatcccacaggccatctttgctcagaggatcttgtgccgg
tcccagggaactctctctgacctgctgaggaatcctaaaccgtggagtaaactcaagtct
ggccgggagacgttcaggaggatgtggaagtggctccaggagcccgagttccagcggatg
tcggcgctcaggcttgcagcctgcaagcgcaaagaacaggagcaacacaaggaccgcaac
acggcccccaagaaacagcggctggtcttcactgacttgcagcgccgcacactcatcgcc
atcttcaaggagaacaagcgtccatccaaggaaatgcagatcaccatctcccagcagctc
ggcctggagctcagcaccgtcagcaacttcttcatgaacgcgcgccgccgctgtgtggac
cgctggcatgatgaccatggtaccagtcccgggcagccgggcacatccgccaccaccttc
tctaaggcctga
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