Scomber japonicus (chub mackerel): 128361779
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Entry
128361779 CDS
T09718
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128361779
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128361779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
128361779
NCBI-ProteinID:
XP_053178312
LinkDB
All DBs
Position
1:complement(18930509..18944395)
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AA seq
439 aa
AA seq
DB search
MMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDE
VQVLDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFA
WEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTR
PGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQ
EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQAN
NSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRPDSALTNTYSALPPMPSFTMANN
LPMQPSQTSSYSCMLPTSPPVNGRSYDTYTPPHMQAHMNSQSMTTSGTTSTGLISPGVSV
PVQVPGSEPDMSQYWSRLQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacaaggtgtatgacatctgtgatgaaggtcacagtggcgtaaaccagctt
ggtggtgtgtttgttaatggtagaccgctgccggattccaccaggcagaaaatagttgaa
cttgctcacagtggtgctcgaccctgcgacatctccaggatactgcagacccatgatgaa
gtccaagtgctggacagtgaaaaggtatccaacggctgtgtgagcaagatcttgggcaga
tattatgaaacgggctccataagaccgagagcgataggcggcagcaagcccagggtcgcc
actccagaggtggtcgcgaaaatcgcgcagtacaagcgggagtgtccgtctatcttcgcg
tgggagatccgtgacagacttctgtcggaggggatctgcaccaacgacaatatacccagt
gtgtcatcgataaacagagtccttcgcaacctggctagtgaaaagcaacagatgggcgca
gatggcatgtatgacaagctgagaatgctcaacggtcagacaggaacttgggggacccgg
cccggctggtaccccggaacatcagtgccagggcagcccaaccaagatggttgccagcaa
caagacggtgcaggagaaaacacaaactcaatcagctcaaacggcgaggactcagaggag
acacagatgcggctgcagctaaagagaaagctgcagagaaatcgcacgtccttcacacag
gagcaaattgaagcactggaaaaagaatttgaaagaacccattatccagatgtgtttgca
cgagagagactagcagcaaaaatcgacctgcccgaagcaagaatacaagtatggttctca
aacagaagagcaaagtggaggcgagaggagaagctgcggaaccagcgccggcaggccaac
aactcctccagtcacattcccatcagcagcagcttcagcaccagtgtctaccaggccatc
ccacagcccaccacaccggtgtctttcacctcggggtcaatgctgggtagacctgactca
gcactcacaaacacctacagtgcgctgccccccatgcccagcttcaccatggcaaacaat
ctacctatgcaacccagccagacctcctcttattcctgcatgctgcctaccagtccgcct
gtgaacgggcggagctacgacacatacacgccccctcatatgcaggcacatatgaacagc
caatcaatgaccacttctggtaccacctcaacaggactcatctctcctggagtgtctgtc
cctgtccaagtcccagggagcgagcctgacatgtctcagtattggtcaagactacagtag
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