Scomber japonicus (chub mackerel): 128361846
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Entry
128361846 CDS
T09718
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128361846
04020 Calcium signaling pathway
128361846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128361846
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128361846
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128361846
NCBI-ProteinID:
XP_053178386
LinkDB
All DBs
Position
7:complement(16521995..16606691)
Genome browser
AA seq
2354 aa
AA seq
DB search
MARFGDDVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRE
NCFTVNRSLFIFGEDNMVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPM
SKRLEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHM
NISVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHSTCMPEPGILENETVDSSEFEFPCGVRQCPAKYNCGDTWIGPNDGITQFDNI
LFAVLTVFQCITMEGWTTVLYNTDDALGPNWNWLYFIPLIIIGSFFVLNLVLGVLSGEFA
KERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDALRRLPE
WSTGGVYVLKRATTIKRRGMDVVCRGQPGEEQYGDISSVGIPMARASIRSARRGPTAYFR
RKERLLRISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPHWLSTFLYYAEFLFLALF
LTEMFLKMYSLGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRI
FKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNF
DTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAI
HRSRPTYSCSLEEAQGSIRECRPPPPLNPSNSFMSRRERSKRMTMSVWEQRTSQLRKHRQ
MSSREILYNNPSEENDGPPAAAQAQHGHPLSLHRKTMQQTPSGSLKHLTDPLASPSKNQA
VDMPLDATLSGDITDPSMSVLMPESLDPMKVLLPDASVTMAVPEPPEVQPVTEDGKLGVN
HNTNSERRSPRLNGERQHRAVKKFRPPDNNDTLTPEMGGHGGVRGRRAHCDHQTGTRSQG
SSPRNGGHLENRSVSRERKRNPGKVEEKEAESEKREGEVSKPEENRQGNCNEGGDTDPSA
NHTGDQKQEEPQQQSDPSPPVVPESNKEDKEAEQDQDKSQLTSSVIIEVPNEQSSMELST
ITVNSKDPETCKSEKEETEETQPVNTVTPDSMFIFKPDNPVRRVCHYVVNLRYFEMSILL
VIAASSIALAAEDPVATSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDL
WNILDFIVVVGALVAFALTNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDC
VVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYIDYGKDKK
EVKGRHWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSI
FYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMP
QNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPTYDAVLKHLNTAFTVLF
SVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVELQSFPTFNMSFLKLFRAARLI
KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHINQHN
NFKTFSGALMLLFRSATGESWQEIMLSCLGGQQCETDPSHTAVHTTAQEGGCGSDFAYFY
FVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYT
DMYEMLTNMSPPLGLGKKCPSKVAYKRLVLMNMPVDDDMSVHFTSTLMALIRTALEIKIA
RGGEDRNQMDLDLQKEISVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSK
AKKLRQQLEEQKHAPMFQRMDASSLPQEILCNANMFFKHSAGSALTRGGFVALSPISPQE
MFLQPHSREEKEGDDDDNYHSPYHPYHNPHHHHLHTLVSDVVEYNQLKQQERRDPTVIKS
PQRAASIRASSMPRLAVDPQPGMSADSKLMKRSFSTIGDQCVNSLWQEQHSLERISPDDT
YRPRQKNFRGMRINHREISSHERGRSKERRHLLSPDVSRCNSEERSRDPSCERTQSRSPS
EGRAHTLQRQVNTSGSPGPSASDSGTPRNRRQLPQTPSRPRPYISYSPLVCRAHPSATLA
TSSEGQTQPQDGPGGSTETSWRANKDGKPLAAGQGSSGSQVSGPSHPSPHRYISEPYLPF
HEDLSGGEAGEGQETLTFETAMATSLGRANAINSAPQLRHSWQVPNGHFRKPLGQSSPAD
ASELLSDTDEDDRC
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggcccgatttggagacgacgttccgggcttgttgagctcaggagatggagggtccgag
cgcaacaggaaccgcgatggcgcggccgtgtccacaggtggcatctccccagccttcaag
cagaccaaagcgcagcgtgcccgcaccatggccttgtacaaccccatcccggtcagggag
aactgtttcaccgtcaacaggtccctcttcatctttggcgaggacaacatggtcaggaag
tacgccaagaaaatcattgaatggcctccgtttgagtacatgatcctcgccacgatcatc
gccaactgtatcgtcttggctctggagcagcaccttcccggagaggacaaaacgcccatg
tctaagaggctggagaagacagagccctacttcatagggatgttctgttttgaggcgggg
ataaagatcatcgccctgggctttgtatttcataaaggctcctacctcagaaatggatgg
aacgtcatggacttcattgtggtcctcagtgggatcctggctgcagcaggggctcacatg
aacatctcagtggacctgaggactctgagggcagtgcgagtgctccggcccctcaaacta
gtctcaggcatccccagtctgcagatagtcctgaagtctataatgaaggccatggttcct
ctgctgcagattggcctgctgctcttttttgcaatcctcatgtttgccatcatcggctta
gagttttacagtggcaaacttcattctacctgcatgccagaacctggaatactagaaaac
gagacagtggactcttccgagtttgagttcccatgtggcgtgcgtcagtgtcctgccaaa
tacaactgcggcgatacttggattggccctaatgacggcatcacccagtttgacaacatc
ctgtttgctgttcttactgtcttccagtgcatcaccatggagggatggaccactgtactc
tacaataccgatgatgccttgggccccaactggaactggctctactttatccctctcatc
atcatcggctccttctttgtcctgaacctggtgctgggagtcctctctggggaatttgcg
aaggagagggagagagtggagaaccgcagggccttcatgaaattgagacgccaacagcag
attgagagagagctcaacggctaccgggcctggatcgacagagcagaggaggtgatgctt
gctgaggagaataagaattcaggaccttctgcactcgatgctctcaggaggctcccagag
tggagtacaggtggtgtctatgtgttgaagagagccaccaccataaagaggagaggaatg
gatgtggtgtgtcgagggcaaccaggggaagaacagtatggtgacatctcctctgtgggc
atccccatggccagagcaagtatcaggagtgccagacgaggtccaacagcatattttcgc
cgtaaagagcgtctcttgcgcatctccatccgccgcgtggtgaagacacacaccttctac
tggacagtgctgggtctggtggctctcaacacgctgtgtgttgcaattgttcaccacaat
cagcctcactggctgtccaccttcctctactatgcagagttcctgttcctcgctctgttc
ctgactgagatgtttctgaagatgtacagcttgggcccacgcctctacttccactcatct
ttcaactgctttgattgcagtgtgattgttggcagtatctttgaagtgctgtggggtttc
ttcaggcctggcacttcctttggcatcagtgtcctgcgtgctctccgtctgctgaggatc
ttcaagatcacaaagtattgggcgtctctgaggaacctggtcgtctctctgatgaattct
atgaagtccatcatctcccttattttccttctcttcctcttcattgttgtcttcgcactt
cttggcatgcagctctttggtggaaggttcatcttcgaagactacaccccaacaaacttt
gacacctttcctgcagccatcatgactgtctttcagatcctgacaggagaggactggaac
gaggtgatgtacaacggtattcgttctcaaggaggagtgaaatcaggcatgtggtcctcc
atctactttatagtgctcacactgtttggaaactacactctgctgaatgttttcttggcc
attgctgtggacaaccttgccaatgcacaagaacttactaaggacgaagaggaagcagaa
gcagcattcaatcagaagcatgctctccagaaagcaaaggaggtcggacccttgtcctcc
ttcatgtcttcagagggaagccggagaaggcggccctacctttacaggaaaagagccatc
caccgcagtcggcctacctactcctgctccctggaagaggcccagggcagcatcagggag
tgccgtccacccccaccactcaacccctctaactctttcatgtccaggagagagagaagt
aaaaggatgaccatgtcagtgtgggagcagaggaccagccagctgcggaaacaccgccag
atgtccagccgagagatcctgtacaacaaccccagcgaggagaacgatgggccgcctgct
gcagctcaggcccagcacgggcatccactgtcacttcaccgcaagaccatgcaacaaaca
ccatctgggagtctgaagcacctgacagaccccctggcgtcaccatccaaaaaccaggct
gtggatatgcctctggatgctaccctctctggtgacattacagatccgtcaatgtcagtg
ctgatgccagagtcactggatccaatgaaagtactccttcctgacgcttctgtgaccatg
gctgtaccagagcctcctgaagtacagcccgtcactgaggacggaaaacttggtgttaat
cacaacaccaacagtgagcgcaggagccccagattgaacggcgagcgtcagcatagggca
gtgaagaagttccgaccacctgataacaatgacaccctgacacccgagatgggaggtcat
ggtggggtcagaggcaggagggctcactgtgaccatcagactgggaccagaagtcagggg
tcatcgccgcggaatggaggccacctggagaatcgatcagtcagccgggagcgaaagaga
aacccagggaaagtagaggagaaggaagcagagtctgaaaagagggagggagaggtttcc
aaacctgaggagaacagacaaggtaactgtaatgagggaggggacactgacccatcagcc
aaccatactggtgaccagaagcaggaggagcctcaacagcaatcggacccatctccacct
gttgtcccagagagcaacaaagaggacaaggaagcagagcaggaccaggataaatctcag
ctcacctcaagtgtgatcattgaggtgcccaacgagcagtcgtctatggagctctccacg
atcacagtcaacagtaaagaccctgaaacctgtaaatcagagaaggaggagacagaggag
acacagcctgtcaacactgttactccagacagcatgttcatcttcaaacctgacaaccca
gtgcgtcgagtgtgtcattatgtggtgaacctcaggtacttcgaaatgtccatcctcctg
gtcatagctgctagtagtatagcactcgctgcagaggaccctgtggccacctcctctgac
tggaataaggttctacggtattttgattatgtgttcactggagtcttcacatttgaaatg
attataaagatgattgaccagggtctaatccttcatgatggctcctacttcagagacttg
tggaacatccttgacttcattgttgttgtgggagcactggtggccttcgccctcaccaat
gtgatgggaaataacaaaggacgggacattaaaaccatcaaatctctgagagtgttgcgt
gtcctcaggcccttgaagaccatcaagagacttcctaaactcaaggcggtattcgactgc
gtggtgacatctctgaaaaatgtcttcaacatcctgattgtctacaagcttttcatgttc
atctttgccgtcatcgctgtgcaactcttcaaggggaagtttttctactgtaccgacagt
tcgaaggacacagagaaggactgccagggttattacattgattatgggaaagacaagaaa
gaggtgaagggaagacactggaaaaggcatgagttccactacgacaatgtcatctgggct
ctgctgactctcttcactgtttccactggagagggatggcctcaggtcctgcagcactca
gtcgatgttacagaggaggacaggggtccgagccacggcaacaggatggagatgtccatc
ttctatgtcatctactttgttgtctttcctttcttcttcgtcaacatcttcgtggctctc
atcatcatcacctttcaagaacagggtgataagatgatggaggagtgcagcctggaaaag
aacgagagggcatgcatagactttgccatcagtgccaagcccctaacccgttacatgccc
caaaaccggcacacgttccaataccgtctgtggcattttgtggtgtccccatcttttgag
tatactgtcctggccatgattgctctcaacaccattgtactgatgatgaagtattactct
gccccgccgacatatgatgccgtactaaagcacctgaacacagcttttactgttctcttc
tctgtcgagtgtgtcctcaagatcatggccttcggctttctgaactactttcgagacacg
tggaatattttcgacttcatcactgtcttgggcagcatcactgagattgtggtagaattg
cagtcttttccaacgttcaacatgagtttcttgaagctgttccgagcagctcgcctgatc
aagctgctgagacaaggctacaccattcggatccttctgtggacctttgttcagtcattc
aaggctttgccctacgtttgcctgctcatcgccatgctcttctttatctacgccatcatt
ggcatgcaggtgtttgggaacattaagctgaatgaggagactcacattaaccagcacaac
aacttcaagaccttctctggtgctctgatgctgctcttcaggagtgccacaggggagtca
tggcaggagatcatgttgtcatgtctggggggacagcagtgtgagacggatccctcgcat
acagcagtacacacaactgcccaggagggaggctgtggctccgactttgcctatttctac
tttgtctccttcatcttcttcagctccttcctgatgctgaacctgttcgtggctgtgatc
atggataactttgagtatctgacccgggactcgtccatcctgggtccccaccacctggat
gagtttgtccgaatctggggggagtatgatcgtgctgcctgtggtcgcatccattacact
gacatgtatgagatgttgaccaacatgtcgccacctctaggcctgggcaagaaatgcccc
tccaaggtggcatataagagactagtcctgatgaacatgcctgtggacgatgacatgtct
gtccacttcacctccaccctcatggccctcatccgcacggccctggagataaagatagcc
cgaggaggagaggatcgaaatcagatggacctggacctccagaaggagattagtgtcata
tggcctcacctctctcagaagacactggacttgctggttcccattcacaaagccagtgat
atgacaatagggaagatctatgctgccatgatgatcatggactactacaagcagagcaag
gccaagaagctccgacaacaactggaggaacagaaacatgcgcctatgttccagcgtatg
gatgcctcctctctgcctcaagaaatcctatgcaatgccaatatgttcttcaaacacagt
gctggatctgctctcaccagaggaggctttgtggcactcagccccatctctccccaagag
atgttcttgcagcctcactctagggaagagaaggagggagatgacgatgacaactaccat
tcaccctatcacccttaccacaacccacatcatcaccatttacacacactggtgtcagat
gtagttgagtataaccaattgaagcagcaggagaggcgggacccaacagtgataaaatca
cctcagcgggcagcatctatcagagcatcctctatgcccagactggctgttgatccacag
cctggaatgtcagcagacagtaagctgatgaagcgctccttctccaccatcggtgaccag
tgcgtgaacagcctgtggcaggagcagcactctctggagagaatcagccctgacgacaca
tacaggcctcgccagaagaacttccgaggcatgagaatcaaccatagagaaataagtagt
catgagagagggcgatctaaggaacggcgccacctactgtctccagatgtgtcccgctgt
aactctgaggagcgcagccgggacccatcatgcgagaggacacaatcccgctcaccaagt
gaaggacgtgcacacaccttacagagacaggtcaacacatcaggcagccccgggccttca
gcctcagactctggtactcctcgtaatcggcgccagcttccccagacaccctctcgtcca
cggccttacatctcctactcacctctggtctgccgagcccacccatctgccacactagca
acctcctctgagggacagacccagcctcaggatggccctggtggctctacagagacgtcg
tggagggccaataaggatggcaagcctctggctgcaggtcaggggtcatcaggaagtcag
gtttcgggaccaagccacccatctcctcaccgctacatctcagagccctacctcccattt
cacgaggacctcagtggtggtgaagcaggtgaggggcaggagaccctcacttttgagact
gctatggcaaccagtctgggacgtgccaatgccataaactccgcccctcagctcagacac
tcctggcaggttcctaacggacatttccggaagcctttgggccagtctagcccagctgac
gccagcgagctgctaagtgacacagacgaggacgaccgctgctaa
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