Scomber japonicus (chub mackerel): 128361901
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Entry
128361901 CDS
T09718
Name
(RefSeq) WD repeat-containing protein 47-like
KO
K24746
WD repeat-containing protein 47
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128361901
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
128361901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
LisH_TPL
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
TPR1-like_2nd
WD_LRWD1
LisH_WDR26
Motif
Other DBs
NCBI-GeneID:
128361901
NCBI-ProteinID:
XP_053178458
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Position
7:21564331..21572376
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AA seq
887 aa
AA seq
DB search
MTAEETINIKEVEVIKLMLDFLNSKKLHISMLALEKESGVINGLYSDDMLFLRQLILDGQ
WEEVMQFIQPLEGMDKFDKKRFRYIILKQKFLEALCVNNAMSAAEDPQNLELTMREAVKC
LHSLEEFCPSKDDYSKLCLLLTLPRLTHHAEFKDWNPSTARVHCFDEACTMVAEFIPADR
KLSEAGFRASGNRLFQLLIKGILYECCVEFCQSKATGEEITEGEVLLGVDVLCGNGCDEL
DLSLLSWLQNLSPGAFSCAFQQKTLNIHVDRLVKPSKAGFADLLTPLINRLSPCPTSPFH
QRPHSADTYMSRSLNPALDGLSHGLAAHDKRGMEANVKSTLSRSLVENNVHQQDDSPERY
QTDLKHPQGLDGPNTTRTPLTPGRDGGTACSTETNEHIQEYYRQRLRVQQHLEQKQQQRQ
LYQQMLLEGGVKPQDGAQHGLTETFLSRSIQKLEEMNVGIDHRGDEVMTHLGQQCNGVRN
NSSTSSPRTSNTRHTPETGLQKEKLGGVSSSTPLRTGNHGLPSLGESPVPASQSTEKIKG
SVPTVQDDSGSSATRSAAQESETPFVKVSTLEDTQAVRAVAFHPSGSLYAVGSNSKTLRV
CAYPDTLTASGTGAVKQPVVRFRRNKHHKGSIYCVAWSHCGQLLATGSNDKYVKVLPFNA
DSCNATGPDLEFSMHDGTIRDLAFMEGPESGGSILISAGAGDCNIYTTDCQRGQGLHALS
GHTGHILTLYTWGGWMIASGSQDKTVRFWDLRVPSCVRVVGTTLHGSGSAVASVAVDPSG
RLLATGQEDSTCMLYDIRGGRIVQTYCPHSSDIRSVRFSPGAHHLLTGSYDNKIIISDLQ
GDLTKPLPQTVTGEHWDKVIQCRWHPHDQTFLSSSADRTVVLWAPNS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagaggagacaatcaacatcaaggaggtagaggtgatcaagctgatgctggac
ttcctcaactccaagaagctgcacatcagcatgctggccttagagaaggagagtggcgtc
attaatggactatactctgatgacatgctcttcctcaggcaactcattctggacggccag
tgggaggaagtgatgcagtttattcagccgttagaaggaatggacaagtttgacaagaaa
aggttccgctacatcattctgaagcagaagtttctggaagctctatgtgtaaataacgcc
atgtctgctgctgaagaccctcagaatctggagctcaccatgagagaggcagtcaagtgc
ctccacagtctggaggagttttgtccatccaaagacgactacagcaagctgtgtctcctc
ctcacgctgccacgcctcacccaccacgccgagttcaaagattggaacccgagcacggca
cgcgtccactgcttcgatgaggcctgcactatggtagctgagttcattccagcagatagg
aagctgagcgaggcaggcttcagagcgagcgggaaccgccttttccagctgctgatcaaa
gggatcctttatgagtgctgtgttgagttctgtcagagtaaagcaactggtgaggagatc
acagagggcgaggtgttgcttggcgtggatgtgctctgtggcaatggctgtgatgaactg
gatttgtcgctgctctcatggctgcaaaacctctctcctggtgccttctcatgcgccttc
cagcagaaaaccctcaacatccacgtggaccggctggtgaagccgagcaaggccggcttt
gccgatctcctcacgcccttaatcaaccgcctgtccccctgccctacctcacccttccac
cagaggcctcattcagctgacacctacatgtccaggtccctgaacccagctctggatggc
ttgtcccatggcctggcagcccatgataagagagggatggaggccaatgtgaaatctacc
ctcagtcggagcctagtggaaaataatgtgcatcagcaggatgattcacctgagaggtac
cagacagacctgaagcatccacaggggctggatggccccaacaccacacgcacccctttg
actcctggaagagatggtggaacagcctgcagcacagaaacaaatgagcacatacaggag
tattacaggcagcgcctccgtgtgcagcagcacctggagcagaagcagcagcagcggcag
ctttaccagcagatgctgctggagggaggagtgaagcctcaggacggagcccaacacggc
ctcactgagaccttcctcagcagatccattcagaagttggaggagatgaatgtgggcatc
gaccaccgaggagatgaggtgatgacacatctgggccagcagtgcaacggagtaaggaat
aacagcagcacttctagtcccaggacttccaacacccgccacacaccagaaactggactt
cagaaggaaaagctaggtggtgtaagcagcagcaccccattaaggacggggaaccacggc
ttgccttccctcggcgagtccccagttcctgccagtcagagtactgagaagatcaaaggg
tctgtccccacagttcaagatgattctggctcttctgcaacacgtagcgcagcacaagag
tccgagacaccgtttgtcaaagtgagcacacttgaagacacgcaggcagtgcgtgcggtg
gccttccatccttctggatcactttatgctgtcggctccaactccaaaaccctgagagtg
tgtgcctaccccgatacactgactgccagtggtacaggtgcagtcaagcagccagtggtg
cgcttcaggaggaacaaacaccacaagggctcaatctactgcgtagcgtggagccactgt
ggacagctgttggccaccggctccaatgataaatacgttaaggtcctgcctttcaatgca
gacagctgcaatgccacaggaccagatctggagttcagcatgcatgatggtaccatcagg
gacctggccttcatggagggccctgagagtggaggatccatattgatcagtgccggggcc
ggagactgcaacatctacaccactgactgtcagagaggacaaggacttcacgccctgagt
ggacacaccggtcacattctgactctgtatacatggggaggctggatgatcgcctctggc
tcccaggacaagactgtccgtttctgggacctgcgtgtgcccagctgtgtgcgtgtggtg
ggaacaaccctgcatggctcaggaagtgcagtggcatcagtggcagtggatcccagcggc
cgcctgctggccacgggtcaggaggacagtacctgcatgttgtacgacatcagaggaggc
cgcatagtccagacgtactgtccccacagcagtgacatcagatcagtgcgcttctcaccc
ggagcccatcatctcctcactggatcctacgacaacaaaatcatcatcagtgacttgcaa
ggtgacctaacaaagccactccctcagacagtgacaggggaacactgggacaaggtgatc
cagtgtaggtggcacccacatgaccaaaccttcctgtcctcctctgcggatcgaactgtg
gtcctctgggcaccaaactcctga
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