Scomber japonicus (chub mackerel): 128361904
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Entry
128361904 CDS
T09718
Symbol
nr5a2
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128361904 (nr5a2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sjo03310
]
128361904 (nr5a2)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
128361904 (nr5a2)
Nuclear receptors [BR:
sjo03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
128361904 (nr5a2)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
DUF5134
FliG_M
Motif
Other DBs
NCBI-GeneID:
128361904
NCBI-ProteinID:
XP_053178461
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Position
7:21321003..21389872
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AA seq
523 aa
AA seq
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MLPKVETESLGLSRSYGEQRHMPRNMQAPQLKMMDYSYDEDLDEMCPVCGDKVSGYHYGL
LTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCPYCRFQKCLTVGMKLEAVRADR
MRGGRNKFGPMYKRDRALKQQKKALIRANGLKIEAMTQVMQAVPTDLTISSAIQNIHSAA
SKGLPLSHHAGHHPGHHHHHHHHHHATALPPTDYDRSPFVTSPVSMAMPPHAGSLQGYQA
AYGHFQGTRTIKSEYPDPYTSSPESIMGYAYVDAYQSGSPPSFPHLIVELLKCEPDEPQV
QAKILAYLQQEQASRGKHEKLNTFGLMCKMADQTLFSIVEWARSSIFFRELKVDDQMKLL
QNCWSELLILDHVFRQVVHAKEGSILLVTGQQVDYAVIASQAGATLNNLLSHAQELVAKL
RSLQLDQREFVCLKFLVLFSLDVKNLENFHLVESVQEQVNAALLDYVMCNYPQQTDKFGQ
LLLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLLIEMLHAKRA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccaaagtcgagactgaatccctgggactctctcgatcgtatggcgaacaaagg
cacatgccaagaaacatgcaagccccccagttaaaaatgatggactactcttatgacgaa
gacttggacgagatgtgtccggtgtgcggagacaaggtttcagggtatcactacggactc
ctgacatgcgagagttgcaagggcttcttcaagcgcaccgtccagaacaacaagcgctac
acatgcatagagaaccagagctgccagattgacaagacccagaggaagcgctgcccatac
tgccgcttccaaaagtgcctcaccgtcggcatgaagctagaagctgtacgggcggatcgc
atgcgtggcggtcgcaacaagttcggcccaatgtacaaacgtgaccgggcccttaaacaa
caaaagaaggcactgatccgagcaaacggcctaaagattgaggccatgacccaggtgatg
caagccgtgcccaccgacctcaccatctcatcagctatccagaacatccactcagctgcc
tccaagggccttccactgagccaccatgctggccaccaccctggtcaccatcaccaccac
catcatcatcatcatgccaccgcccttccccccacagactatgaccgcagcccgttcgtc
acttcacctgtcagcatggcaatgccgccacatgctggcagcctgcagggctaccaggca
gcctacggacacttccagggcacacgcaccatcaagtctgagtacccagacccatacact
agctcgccggagtccattatgggctacgcctacgttgatgcctaccagtcaggctcgcca
cccagcttcccccacctgatcgtagagctgctcaagtgtgagccggatgagccacaagtt
caggccaagatcctggcctatctgcagcaggagcaggccagccggggaaagcacgagaag
ctcaacaccttcggtctcatgtgcaagatggctgaccagacactcttctccatcgtggag
tgggcacgcagcagcatcttcttccgtgaattgaaggtggacgaccagatgaagcttctg
cagaactgttggagtgaacttctcattctcgaccatgtcttccggcaggtggtacatgcc
aaggagggctccatcttattggtcacaggccagcaggtggactatgcagtgattgcatca
caggcaggagccaccctcaacaacctgttgagccacgcccaggagctggttgccaaacta
cgctccctgcagctggaccaacgggagtttgtctgcctcaagttcctggtcctcttcagc
ttggatgtgaagaacctggagaacttccatttggtagaaagcgtccaggagcaggtcaac
gcagcactgctggactacgtcatgtgtaactacccgcagcaaacggacaagtttggccag
ctgctcctccggctgcctgagattcgagccatcagcttgcaggccgaagaatacctttac
tataaacacctgaatggcgacgtgccctgcaacaacctgctcatcgaaatgctacatgcc
aagagagcctag
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