Scomber japonicus (chub mackerel): 128361912 Help Entry 128361912         CDS       T09718                                  Symbol dmxl2 Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04142   Lysosome Brite KEGG Orthology (KO) [BR:sjo00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     128361912 (dmxl2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sjo04131]     128361912 (dmxl2) Membrane trafficking [BR:sjo04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     128361912 (dmxl2)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     128361912 (dmxl2)    RAVE complex     128361912 (dmxl2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML_2 Beta-prop_IFT140_1st WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_RIG_1st NBCH_WD40 Motif Other DBs NCBI-GeneID:  128361912 NCBI-ProteinID:  XP_053178475 LinkDB All DBs Position 1:complement(29180803..29221616) Genome browser AA seq 3061 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP QGNRILAATERLQLWAPPLTDALIEEEDGQLNDDKPHPVLNDWNCVWQCKTAASVHIAKW SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDLSDKKPPPVHFSFVYLAHPRSVTGMS WRKTSKFMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISENTHSFSSSLPGLAG GKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDAHTHRHIAHHANALCHF HISASINPNTDIPSVLADSAVFNPDDGTGGGGFVVHWLNNKDLSFTSSMDLFMLQLRKFS EQQLDQTTEDPLDPEGSPMKFDFDLDEMSDKASSEHGEEGEPGEQGSTKASSPGSSSSMP LPSMLLERKMETLTTEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR IPVAFPTGDANSLSKNILMYACTLTEGASAGAGEQGRMVQRISRSASASAGLGSPALAPS SNSHPGTSPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHKFRYCGHRFHLNDQSCH TVLPLLLTSSHHNALLTPPSAPGSLEGEQPPSFPLPKGLPRKQLRNAATRTFHDPNAIYS ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFV ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC GANTQLLHVFQEDFILGYKPQKEPEAYTPAFPPGEDYQPAPFSEKFFLVVIEKDLNRNSV LQMWHLHLKSVQACVDEPSPDYSFQSQLMVPNQVLNPDSSPETSPVRPLPRSASTANLQS ASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRF WHCAVEGDDWSNEDDRDNRVYRWEPWALMNEEEDNNSAVCVSGRPVAVSCSYIGRLAVAF KQPRQGQLQGSGEDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNL FVYSRSDLYMSRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQIS SKEGVAVITLPLGGSIKQGIRSRWILLRSVDLLSSVDGTPSLPVSLSWVRDGILVVGMDC EMHVYAQWHQDKKPGEGGEGNLSSADIAGGQTSGSASVFEGRARSKSVFEGSAAVDEALR APSGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVR DVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLMLADLDTS YKSAEEAAKGTKVADGEGGHKSTEDQYADLFQVPAVTTDDFVNFATEKPEKKSRVINLSQ YGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDKQYTGGE ALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAM QRGDPQWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRHNDPLDAALFYLAMKKKAVLW GLFRSQHDEKMTQFFKNNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEV LMEKMDDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSI AYWIMKDYTRALDTLLERIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFANPE GTATTVGLTAEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSGSSP LSKASSKTNLNSTQPLENGTQGGLDWASPAAPTPAWGGNDSLGGLDWSQPMVKVEEDELK LDWGGDKEDDEDEEDDGLTMKKPEAETKVDGGSESSGHKLQREDSQGESEVDVIAEQLKF RACLKILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHKICNYKVEGKEEDSEVERW GERAASVDISDEALERIEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYC SLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIAATKTVIANP VLHLSNHIHDILHTITLMEIPPHPDIMDDRVNALHTLAASLSACVYQALCDSHSYSSQTE ANQFTGMVYQGLLLSERKRLRTESIEEHITPNSAPAQWPGVSSLISLLTSAREEDQPRLN VLLCEAVMAVYLALLIHGLGTHSSNELFRLAAHPLNNRMWAAVFGGGAKVIIRPKRPETP PVAPPQPPAEDVDRYRRRFNMRMLVPGRPVKETPATPPPVPTERPAYREKFIPPELSMWD YFVAKPFLPLSDSNALCDSDESGAEDDEDDDDAFLSDTQITEHSDPNSYSWTLIRLVMVK LAHHSVKNFLPLTGLDFTDLPVISPLSNAVLKTLENWEQLLLDRMNKFDGPPPNYINTYP TDLSAGGGPAILRHKAMLEPDNTPFKTKNHQSFPARRLWHYLVKQEALQETLIRYIFTKK RKQSESVDNHMDHVTPNCIAGASSPNKVEADLGYPGGKAKIIHKESDIIMAFAINKANSN EIVLASTHDVQEVDVSTLVAVQPYTWIGDDFDKESRSSDDIDHRSSHTNIAQASSVPFAP PQMPVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNR PQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKT CGDFAFITSSSLIATAGQSNDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAPKQQL LITGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNMKVWKLAGH GLMHSFSTEHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSLVDV L NT seq 9186 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcatcaggtgctgacgggagctgtaaaccctggagattgctgctactcggtg ggaagcgtgaatgacatcccgtttacggcctatggctcaggttgtgatgtagtgatcttg gcgagcgactttgactgcgtgcagattatcccgggagctcagaatgggaacatacaggtg ggctgtgtggagtgctcccaccagcttggcaggatcgcagcatcctacggtaacacagtc tgcatctttgagcctctttctaccaacccaaacaaacgccacaagcagcttaactatcag tggcaaaagacaggacagttcttcctcgatgccatcacctacaacctggcctgggaccca caagggaaccgtatcctagcagcaactgagcggctccagctgtgggctccgccactgaca gatgccctgatagaggaggaggatgggcagttgaatgatgataagccccaccctgtcctt aatgactggaactgtgtctggcagtgcaagactgctgcatctgttcacattgccaagtgg tctcctgatggggagtactttgcaacagttggcaaggatgactgtttactcaaggtgtgg tatcccaccacgggctggcgttctgcagtggtggtccaggacctttctgacaaaaagcct cctcctgttcacttctcttttgtttatctggcccacccccgctcggtcaccggtatgtcc tggaggaagactagcaagttcatgcccaagggttcagtgtgcaatgtgttgctgacatcc tgtgaagatggtgtgtgtaggctgtggtcagagaccctgcttccagaagacagcctgctt gggggacagatctctgagaacacacactccttcagctccagcctgccaggcctggcaggc ggtaaggacaaaatccaacatgctttggagtcaatccaccacctgaaacatctgcgtcgg ggccggcgacggtcctctgctctggtggcacacagtgagctgctgccttctcagcttggc acacaggacgcacacactcaccgccacatcgctcatcatgccaatgccctgtgtcacttt cacatctctgccagtattaaccccaacacagatatcccatcagtgctggctgactctgca gtgttcaacccagacgatggcactggtggaggaggctttgtagttcactggctcaacaat aaggacctaagcttcacgtcctccatggatctctttatgctgcagcttcgtaaattctct gaacagcagctggaccagaccactgaagatcctctggacccagaaggatcccctatgaag tttgactttgacctggatgagatgtctgacaaagcctcctcagagcacggtgaggagggt gagccaggggagcagggaagcactaaggcatcctcaccaggatccagctccagcatgcct ctgccctcgatgctgctggagaggaagatggagactctgaccacagagtggaacaagagc cccgacatgctgttcacaatccaccctactgatggctctttcctggtttggcatgtgaag tatttggatgaattcaaccagggtatcttcagacaggttcaggtgtccttctcctcccgt attcctgtggcatttcctacaggtgatgccaattcactgagtaaaaacatcctgatgtac gcctgcactttgacagagggggcgagtgctggggcaggggagcaggggaggatggtccaa cgtatctctcgctctgcctcagcttcagcagggctgggttctcctgccctggccccttct tccaactcccatcctggcacaagtcctgctgtcatgatggtctccaagcatgttgatgga tctctcaaccagtgggcagtgacattcgctgagcgctctgccttctccaacgttttgact gtatctcacaagttccgatactgtggccaccgcttccatctgaatgaccaatcctgccac acggtgttgccactgctgctcacctcctctcaccacaatgccctgcttacacctccctca gcccctggcagcttggaaggagagcagcctccttcctttcccctaccgaaaggacttccc agaaagcaacttcgtaatgcagctacaaggaccttccatgaccccaatgcgatctacagt gagctgatcctgtggagggtggatcatattggacccctgtcctgcactggaggggtgtct gaactggctcgtatcaactctctccacacctctgccttcagcaatgttgcttggctacct acactagtacccagctctgtactaggaacatactgtaacagtgccagcgcctgctttgtg gcatcggatggtaaaaacctgcgtctctatcaagctgtggtggacgccagaaaactgctg gatgaactgtcagatcctgaaacttctaaactggtgggcgaagtgtttaacatcgtcagc cagcagtccactgccagacctggatgtatcatagaattggacgtcattacaaaccagtgt ggcgccaacacccagctgctgcatgtcttccaagaggatttcattctgggctacaagcct cagaaagaaccagaagcatacacacccgcctttccgcctggtgaagattaccaacctgcc ccgttttctgagaagttcttcctggtggtgatagaaaaggatctgaacaggaactctgtc ctgcagatgtggcacttgcacctcaagtctgtccaagcctgtgttgatgagccaagccct gattatagcttccagagccagctaatggttcccaatcaagttttgaatcccgactcatct ccggagacctctcctgtcagacccctgccacgttcagcctccacagccaatttgcaatca gccagtaaactcatcctcagctccaaactggtgtacagcaagcgacttgacctgccccat ggggtggaggttaccagagcaaccccctctgcaggtcatctgagctcctcctccatctac ccggtgtgcttggctccctacctgattgttaccacctgctctgactctcgtgtgcggttt tggcactgtgccgtggagggtgatgattggtctaatgaggatgaccgggataaccgggtg taccgctgggagccctgggcccttatgaatgaagaggaagacaacaacagtgctgtgtgt gtgtcagggcggcctgtagctgtgtcctgctcctacatcggcaggcttgctgtggccttt aaacagccacgacaaggacagctgcagggttctggagaggacttctccatgcatgtgtcc atctatgagtgtgagtctactgggggctcagagtgggtgttagagcaaactctccacctg gacgactttaccagaccctcatcaaccctggatccaagagtcagtgtggactccaacctc tttgtctatagcaggtctgacctgtacatgagcagagaccatagctcacccaacatcaag cactatgtccacctggactggctgtcaaaagaggatggatctcacatcctcactgtgggg gttggatccaacattcttatgtatggccgtatctcaggcatggtcaatgagcagattagc agcaaggagggggtggctgtcatcacccttcctctagggggcagtatcaaacaggggatc cgctctcgctggatcctgcttaggtctgtggacctcttgtcctccgtagacggcacccca tctctgccagtttcgctgtcctgggtgagggatggcatcttggtggtgggcatggactgt gaaatgcacgtgtatgcacagtggcatcaggacaagaagcctggtgagggaggggagggc aacctctcatctgctgacattgctggaggtcagacttcaggttctgcttcagtgtttgag gggagagccaggtctaaaagtgtgtttgaagggagtgctgcagtggacgaggcccttcgt gccccatcaggacttcaggaagggggactttttgaggcagctcactccctatccccgact ctgccccagtatcatcccacccagctgttggaactcatggacctgggcaaggttcgccgt gccaaggccatcctcgctcacctggtgaagtgtattgctggggaagttgcagtggtgagg gacgtggaggcaggtgagggcggagcaaggagacatctgtcacggaccatcagtgtgact ggcagcacagcaaaagacactatagtggctggccgcgacgggggcagggattacaccgaa atcaattccatccctcctttgcccctctactctctcatgttggctgacttggatacctct tacaagtcggcagaggaagctgctaagggaactaaagtggctgatggcgaagggggccat aagtctacagaagaccagtatgctgacctcttccaggtgccagcagttaccacagatgac tttgtgaactttgccactgaaaaaccagagaagaagtctcgagttatcaacctatctcaa tatggacctacctactttggaccagagcatgctcaggtgttgtccagtcaccttatgcac tcgagtctcccaggactgaccagactagagcagatgttcttggtggccctggctgatacg gttgcaaccaccagtgctgaggtcaccagctccaccgataaacagtacacaggtggtgag gctcttgatgaatgtggactgaggtaccttctggccatgcgccttcatacctgcctgctc acctctctgccccccctctaccgtatgcagctgctccaccagggtctatcaacttgtcac tttgcatgggccttccactcggaggcagaagaagagctcctgaacatgatcccagccatg cagagaggtgacccacaatggtctgagctcagagctgtgggagtgggttggtggatacgt aacatcaacaccctgaggaaaatggtggagaagttgggtaaagcagcattccagagacac aacgaccctttagatgctgctctgttctacttggccatgaagaaaaaagctgtcctgtgg gggctttttagatctcagcatgatgagaagatgactcagttcttcaagaacaactttact gaagaccgctggagaaaggcagctctgaaaaatgccttctccctgctgggaaagcaacgc tttgaacagtctgctgccttcttcctactggctggatcactcaaagatgcaatagaggtg ttgatggagaagatggatgatctccagttagccatgatagtggcaaggctgtatgaggct gactttgagaactcatccacctgccaaggtctcctttatgagaaggtcctcggctgtaac agagatgggagtggttaccactgttccagactgcatcctgaccctttcctccgcagcata gcttactggatcatgaaggattacacccgagccctggacacactgttggagcgcattccc aaagaggatgacgagaaccctgacgtgatggtgaaatcttgcaacccggtggtgttcagt ttctataactatctgaggacacatcctctgatcatccgtcgccactttgcaaatccagag ggcacagcaacaactgtgggcctgactgctgagaagagcagtgcagatgagatcaacctc atagagcgcaaactgttcttcaccactgccaacgcacacttcaaggttggttgcccggtt cttgccctggaagtgctctccaagattccgaaagttaccaagaaatctggctcctcaccc ctcagcaaagcttcatccaaaaccaacttaaactcgacccaacccctggaaaatggtact cagggaggtttggactgggcttcaccagccgcacctacccctgcctggggaggaaacgac agtttgggtggtttggattggagccagcctatggttaaggtggaagaagatgagctaaag ctggactggggtggcgacaaggaagatgacgaagatgaagaagatgatggtctgactatg aagaaaccggaggctgagaccaaagtagacggaggctcagaaagcagtggccacaaactg cagagagaggactcacagggtgagtcagaggttgatgtgatagcagagcagctgaagttc cgtgcatgtctaaaaatcctgatgacagagctgcgtacgctggccacaggcttcgaggtg gatggagggaagctccgctttcagctgtacagttggctggagaaagagatcgcagccatg cataagatctgcaactacaaggtggagggaaaagaggaagattcagaggtggagcgctgg ggagagcgtgcagcatcagttgacatatcagacgaggccctggagcgtattgaggccggg gcctatgagcgtcaccagatggagcgcagacgtcttcaggccaagcagcagcactctgag agacgcaaggcatggcttaggaagaaccaggccctgctgagggtctttctctcttactgc agccttcatggagccaaaggaggaggagtcacgtctgtacgcatggagcttctgttcctt ctgcaggagagccagcaggagaccacagtgaagcagctgcagtctccactgcctctgccc acaaccctgcctctgctatcagcttgcattgctgctaccaagacggtcatagccaatccc gttctccacctcagcaaccacatccacgacatcctccacaccatcaccctcatggaaatt ccgccacatcccgacatcatggatgaccgggtgaatgctctgcacactctagcagcatct ctgtctgcctgcgtctatcaagcactttgtgacagccacagttatagcagccagacagag gccaaccagtttacagggatggtgtaccagggcctcctgctcagtgagagaaaacgactc cgcacagaaagcatcgaggaacacataactcccaactccgctcctgcacagtggccaggt gtgtcgtccctgatttctttgttgacatcagccagggaggaggaccagccaaggctcaac gtgctgctgtgtgaagcggtcatggcggtttatcttgcattgctcatccatggcctgggc actcacagcagcaatgaacttttccgcctggcagcacatcccctcaacaaccgcatgtgg gctgccgtctttggaggaggagctaaagtcattataaggccaaagaggcctgagacccca ccagttgctccccctcagcccccagcagaggacgtggaccgatacagacgaaggttcaac atgaggatgctggttcctggacgccctgtaaaggagacgccagccacaccacctcctgta cccactgagagacccgcttacagggagaagttcattcccccagagctgagcatgtgggac tattttgtggcaaagcccttcctgccgctgtcagacagcaatgctctgtgtgactcagat gaaagtggtgcagaggatgatgaagatgatgatgatgccttcctttctgacacacagata actgagcactctgaccccaactcctacagctggactttgatccgcctcgtcatggtgaaa ttggctcatcacagcgtcaagaacttcctccctcttactggccttgactttacagatctg ccagtcatttcccctctcagcaatgcagtgttgaagactttagaaaattgggaacagctt ctgctggaccgaatgaacaagtttgatggcccgcctcccaactacatcaacacttatcct actgacctcagcgcaggaggcggccctgccatactgcgacacaaggccatgctggagcca gacaatacacccttcaagacaaagaaccaccagtcctttccagctcgacgtctgtggcat tacctggtcaaacaggaagctcttcaggagactttaatccgttacatcttcactaagaaa aggaagcagagtgagtctgtagacaaccatatggaccatgtaaccccaaactgcatagca ggagctagcagtccaaataaggtggaggcggatctgggctatccaggaggcaaggcgaaa atcattcacaaggagtctgacataatcatggcatttgcaatcaataaggctaactccaat gagatagtactggcttccactcatgatgtccaggaggtggacgtgtctactctggtggct gtccagccctacacctggataggggatgactttgataaggagtctcgcagctctgacgac atagaccaccgttcctctcataccaacatcgcccaggctagctctgtcccctttgcacca ccacagatgccggtctctgcatccatgccatggctcggtagtgggcagaccagcatggga gccagtgtgatcatgaagaggaatctgaacaatgtgaagagaatgacatcccaccccata tatcagtattacatgacaggggctcaggatggcagtgtgagaatgtttgagtggaacaga cctcagcagctcatctgcttcagacaagcaggcaacgctagagtcacccgactctatttc aactcccagggcaataagtgtggagtagctgatggagagggcttcctcagtctctggcag gtcaaccagacatcctccaaccccaaaccctacctgagttggcagtgccacactaagacc tgcggagattttgccttcatcacgtcctccagcctcatcgccacagccggacagtctaat gataacagaaatgtatgcttgtgggacactctgatttcacctagcaatactatggtccat gcgtttccctgccatgagaacggggccactgtgctgcagtatgctcccaaacagcagctg ctgatcactggaggcagaaagggctttgtgtgcgtgtttgacatccgccagagacagctg ctccacactttccaggcccatgactcagccatcaaggccctcgcactggatgcctttgag gacttcttcgtcactggatctgcagagggcaacatgaaggtgtggaagttagctggccat gggctcatgcactcttttagcaccgagcacgctaagcaatccatcttccgcaacatcggt gccggcgtcatgcaggtggagacgcggcccggtaaccgcatcttcacttgcggagcagac ggcaccctgaagatgagggtcctccctgaccgctacaatatccccagcttggttgatgtc ctgtaa

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