Scomber japonicus (chub mackerel): 128361954
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Entry
128361954 CDS
T09718
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03420
Nucleotide excision repair
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128361954 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
128361954 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sjo03051
]
128361954 (rad23ab)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128361954 (rad23ab)
Proteasome [BR:
sjo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
128361954 (rad23ab)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
128361954 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Crinkler
UBA_3
Rad60-SLD_2
UBA_2
Dsc3_N
Ubiquitin_2
DUF1421
CUE
Motif
Other DBs
NCBI-GeneID:
128361954
NCBI-ProteinID:
XP_053178529
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All DBs
Position
7:2125736..2139053
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AA seq
494 aa
AA seq
DB search
MLTITLKTLQQQTFKIDIDPELTVKALKEKIEEDRGKDAFPAAGQKLIYAGKILNDDTLL
NEYKIDEKNFVVVMVTKPKPAPPPQAAPKVTPLPAADPAPAPAPAPAPALTPAPPSSSAP
APASAPTQVPSTPSYTELAPTPTPQSVPPSEALPPAPEKPILSTSSEETTALEPNAAPSA
APASASAASTAPASTAAPAPTPAPAPALAPAPEAGQTALADCSAPASQPAEKPREEPENE
PSATAPVHSSDASLVDELGLLEEAASILVTGQAYENLVSEIMSMGYEREQVVSALRASYN
NPDRAVEYLLMGIPAEATDLLPQEPVRHSAPSNPPTPATQQPQQPPAASTTGPVSANPPP
SAGGGSVSTGNPLEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQHQERFVQM
LNEPRGGDAGGEGAEAPGSRQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNEN
LAANFLLQQTWDDE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataacgttgaagaccctccaacagcagacgttcaaaatagacatagaccca
gaattgacggtgaaagccctaaaggagaaaatagaggaggacagaggaaaagatgcattt
cctgctgcagggcaaaaactcatctatgcaggcaaaatcctgaatgatgacaccttgctg
aacgagtacaaaattgatgagaaaaactttgtggtggtcatggttacaaagcctaaacca
gcccctcctccacaagcagcccctaaagtgactcccttaccagctgcagatccagctcca
gctccagctccagctccagctccagctctaaccccagcaccaccctcatcctcagctcca
gcaccagcctctgccccaacacaagtgccctccacaccgtcatatacagagcttgcaccc
acacccactcctcagtcagtgcctccctctgaagctctgcccccagccccagaaaagccc
atcctgtcaacctcatctgaagaaaccacagctctggagccaaacgcggccccgagtgca
gctccagcatcggcctcagctgcttccacggcccctgcctccactgcagcccctgcccct
accccagctccagctccagcactggcaccggcccctgaagctggtcagacagccctggca
gactgctctgctcctgcttcccagccagcggagaagccaagggaagagcctgagaatgaa
ccatctgccactgcaccagtccactcctctgatgccagcctcgttgatgaactgggcctc
cttgaggaagcagcatcaatactagtaacaggtcaggcctatgagaacctggtgtcagag
atcatgtctatgggttatgagcgggagcaggtggtgtctgcactcagagccagttacaac
aacccagaccgagcagtggagtatctactcatgggtattccagcagaggccactgacctg
ctacctcaggagccagtcagacacagtgctccatccaacccccccacccctgctacacaa
caaccacagcagcccccagcagcctccaccacaggcccagtgtctgcaaacccgcctccg
tctgcaggtggaggctctgtctccacagggaaccctctggagttcctgaggaaccagcct
cagttccagcagatgagacagatcatccagcagaacccggctctcctaccggccctgctg
cagcagctgggccgagacaatccacagctgctgcagcaccaggagcgctttgtccagatg
ctgaatgagccacgtggtggagacgctggaggggaaggagccgaggcccctggctcacga
caaaccaactacatccaggtcactccacaggagaaggaggccatcgagaggttaaaagca
ctgggcttccctgaaggtttagtcatccaggcttactttgcctgtgagaagaacgaaaat
ctggctgcaaacttcctgctacagcaaacatgggatgatgagtga
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