Scomber japonicus (chub mackerel): 128361963
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Entry
128361963 CDS
T09718
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128361963 (ccdc50a)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Others
128361963 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
128361963
NCBI-ProteinID:
XP_053178547
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All DBs
Position
7:complement(18228285..18246028)
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AA seq
632 aa
AA seq
DB search
MAECNISIDQKRLPGVKEVCRDFAVLEDHSLAYNLQEQEIESHLASNVHKSRLVQQDLQV
AKKLQEEEDKIAKVQTKKQFGEIERQDVEIAQEIQEQLVRQAEQQRQQEEKDAAIARKLQ
EKEMKEERKRQKHLEANFEEEYFEDRGAARKPHDLDKHTRHKSSSSSSSPGRYDVYAPVS
SHRDYSPDYSSTEPKRSRYPKQDLAAPHSHSRYPEHYLVAEGGRSRHADPYPEHLLASRG
KHGDRYPNYEPTETGRARGPQGDNTDRVVRRKERPVRPPPPQYPEQRDKEWVREKDRKHD
RHRGRDLELERQMGIDQRRDREQDLRGARARGRDGERSRDRGQSGDRHRVRDRQRQRDEQ
VRTRSRERRLDEDFVERVPREGRASWEEDDDERERRARGRQRVHSNPEEVFDEYRSNGGR
GHTRDFWDPRQGEGPSRERSHTHPDGETGRIVHKGSGAVIAETEYGLTEATKGLTKLDLR
EQELKDMEVARKMQEEEVKASKSHVRAAQVAQDEEIARLLMEQEKKEYRKNREHEKEKER
ERERLAMDRMAMERRRPEGDYRPSSEDVVRPRTREDYEYQRQRNHNKPARPPQPRTHDYE
NVNAGYGHPDHPIPPRAPTRPEAAYKGAYYKR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtaacattagcatcgaccagaaaagactacctggagtgaaagaggtatgc
cgagactttgctgtgctggaggaccacagtctggcctacaacctccaggaacaagaaatt
gaaagccacttggcatccaacgtccataagagccgtctggtgcagcaggacctgcaggtg
gccaagaagctgcaggaggaggaggataagatagccaaggtccagaccaagaagcagttt
ggtgaaattgagcgtcaagatgttgagatagcccaggaaattcaggaacaactggtccga
caggcagaacagcagcggcagcaagaagagaaggatgcggccatagcccgcaagctgcag
gagaaggagatgaaagaggaaaggaagagacagaaacatctggaagcaaactttgaggag
gagtactttgaggatcgtggagctgcaagaaagccacatgacttggacaagcatacccgt
cacaaatctagttctagttctagttccccgggccgatatgatgtgtatgccccagtgagc
tcacaccgtgattactccccagattacagctcaactgagccaaaaagaagcaggtatcca
aaacaggacctagcagcaccccacagccactccagatatccagagcactacctagtggca
gagggagggcggagcaggcatgcagatccatacccagaacacctactggcctccagaggc
aagcatggggacaggtacccaaattatgaacccacagagactggcagagccaggggccca
cagggtgacaacacagacagagtggtgaggaggaaagaaagaccagtcagaccacctccg
ccacagtatccagaacagagagacaaggaatgggtcagagagaaggacaggaaacatgac
aggcacaggggcagggacctggaattggagagacaaatgggaatagaccaaaggagggac
agggagcaggacctcaggggggcgagagcgagaggaagagacggggaaagatccagagat
agaggacagagtggggacagacacagagtgagagacaggcagagacaaagagatgaacaa
gtgagaaccaggagcagggagagaagactcgatgaggacttcgtagagcgtgtcccgagg
gagggcagggcatcctgggaggaggatgacgatgagagggagaggagggccaggggtcgg
cagcgtgtccactccaatcccgaagaggtctttgacgagtataggagcaacggagggaga
gggcacaccagggacttctgggaccctcggcagggggagggtcctagcagggaacgcagt
catactcaccccgatggagagacaggtcgaattgtgcacaaagggagtggagcagtaata
gcagaaactgagtatggactcactgaggccaccaagggactgacgaagctggatctccgt
gagcaggagctgaaggacatggaggtggccaggaaaatgcaagaggaggaagtgaaggcg
agtaagagccatgtgcgtgcagctcaagtggcacaggatgaggaaatcgctcgactgctg
atggagcaagagaaaaaggagtacaggaagaaccgagagcacgaaaaagagaaggaacga
gagagggagaggctggctatggacaggatggcaatggaaaggagacgaccagagggagac
tacaggccgagttcagaggatgttgtccggccccgaacacgagaggattatgaataccag
aggcagaggaaccacaacaagcctgccaggcctcctcagcctcgcacacatgactatgag
aatgtgaacgctggctacggccacccagaccatccgattccccctcgtgctcccaccaga
cctgaggctgcttacaaaggtgcctattacaagcggtga
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