Scomber japonicus (chub mackerel): 128361991
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Entry
128361991 CDS
T09718
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128361991 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128361991 (rexo1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Pre-60S particles
RNases
128361991 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
128361991
NCBI-ProteinID:
XP_053178576
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All DBs
Position
7:complement(24197763..24212831)
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AA seq
1270 aa
AA seq
DB search
MLRSTGFFRGIDCPFYAEYSESKGSRNGCNRPYCHFRHSQQRRLSYGAAADVKKLHSAQK
EQGYDPFNPEVVRPQEQQNGKPAASGDLSGALEMVNKAIEEVRSEVEREKRKLSRIGDEP
YEPTGGTSLSSCNAGKGKAAAAAAAASTHSAYDPGSYQMTSGGYNPTPGCSKYTLDSDNQ
GNNSNSMEYVPTSVKKPLSRTQTHKPPSPPPSPKYSNSTSSSKCKYTVDNSKPSTDMEYD
PLSNYSAGIAGKRKRGESAHTVKGEGSKSHKLPVSDLSDEEYVVAVKKPPQQSVDTKKYT
FSDSDGESSGTEYRPTSLSNLQQRKNNSGSAGEKERKERTKNLLNALTQRNKDDLAQDSD
IQEDILLKDNLEKKKVASRTSHEKSGKSEKVHKLEKELNKTSHSKSGSSSSKDKGSLKNS
NQDSAKKENKSHGKKDDRKNTVKVKTSDKVHREDRKSDSKIKAVEKVKTDHSRRDKDTEN
SARESKKPKIIDKEKEHSKNKERQHKNGKLDSSKTEKDVKKLSKSSSSSGSSNSKGSSSN
SKDKLKPTIGSSNGKKPEKKRRTLSLSHADLFGDESPEEAEPMEVDDDDEEAEEVLVRKS
ADALKRGRLNKRKASELTLSSSEDEADCSQEGSRADKDEVDGAGIDFSSFQDDLDFDSDP
MEECLRIFNESKDVKREDKGRQAKQSSRDSDEDKGTESTLTTLFPGQKKRVSHFVAKGSN
DAPSKSVVRPYKRPSAQEVCYQRMQVAQQQAAQLSASVKAVSHISSPSSSGERKRIAHRP
SPLMSSSKTTGSADAKPASSRVLTPNQTHQSVKAQTTAGIMSKTMSTVSQKRVAHMPTMK
STSMKRPVIPIEFGAKVPNNIRQRYLTAFIDECVKFCPSDDIAFQMGLDEEKLVYDRSNS
KNIYLNVAVNTLKKLRSKSTSCPSPVSKEPGSAANRRIQSHEDVLGGRLAATTSFTVNRM
GKQQEEKLIGATLYRKLKAYLMTEEQLQEHGYPRTNPEASGKAIIYNLPEKKAIADPFTK
ICCRCGAEYKININGNCVRKEECAFHWGRLRRHKVAGGWETIYSCCAGAVGSPGCSVAKQ
HVQDGRKETFDGYVSTFSKSLPPDGNAGVFALDCEMCYTTQGLELTRVTVIDSELKVIYD
TFVKPGSKVVDYNTRFSGVTEEDLESSTITLRDVQAVLLSMFSAESILIGHSLESDLLAL
KLIHSSVVDTAIVFPHRLGLPYKRALRNLMADHLKRIIQDNVDGHDSSEDASACMELMFW
RIKEDAKVKR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggcttcttccgcgggattgactgtccgttttacgcggaatatagc
gagagcaaaggcagcagaaatgggtgtaacagaccgtactgtcacttcaggcacagccag
caaagacggctctcttacggggctgcagccgatgttaaaaagcttcactcggcacagaaa
gaacaaggttatgacccattcaacccagaagttgtaaggcctcaagagcagcagaatggg
aagccggctgcctcaggagacctcagcggtgctctggaaatggtcaacaaggccatcgag
gaggtccgcagtgaggtggagagggagaagaggaagctctctcgcattggggacgaacca
tatgaacccaccgggggcaccagtttgtcttcatgtaatgctggtaaaggcaaagcagca
gcagcagcagcagcagcatccacacactcggcctatgatcctgggagttaccagatgaca
tcaggagggtataatcccacacctggttgtagcaagtacaccttggattcagacaaccag
gggaacaatagtaactcaatggagtatgttcctacttcagtgaaaaagcccctgtctcgg
acacaaacacacaaacccccctctcctccccccagcccaaagtactcaaacagcacatct
tcctctaagtgtaaatacactgtggacaattccaaaccatctacagatatggagtatgac
ccgctctccaactactcagcgggaatcgcaggaaagcgcaagaggggcgagagtgcacat
actgttaaaggagaggggagcaagtcacacaaactaccagtgtctgatttgtcagatgag
gagtatgtcgtagcggtgaaaaagccaccgcagcagagtgtggacacaaaaaagtatact
ttctctgactctgatggggagagctctggaacagagtatcgacccacctcgcttagtaac
ctccagcagagaaaaaacaacagtgggtcagctggagagaaagagagaaaagaaagaact
aaaaacttgttaaacgcactgacacagaggaataaagatgatttggcacaggactcagac
atccaggaagatattttgctaaaggacaacctggagaaaaagaaagtggctagtcgaact
agtcacgagaaaagtggcaaatctgagaaagtgcacaaactcgaaaaggaacttaacaaa
acatcacatagtaagagtggcagcagcagcagtaaggataaaggatcattaaagaactca
aaccaggactctgcaaagaaagagaacaagagtcatgggaagaaagatgataggaagaac
acggttaaggttaagacaagtgacaaagttcacagagaagacaggaaaagtgacagtaag
attaaagctgtggaaaaagtaaaaactgaccacagcaggcgagataaggatacagaaaac
agtgcaagggaaagcaagaaacccaagattatagacaaggaaaaggagcatagcaagaat
aaagagcgacaacacaaaaatggtaaacttgatagcagtaaaacagaaaaggatgtgaag
aaacttagtaaaagcagttctagtagcgggagcagtaacagtaaagggagttcttcaaac
agtaaagacaagctgaagccaaccatcggctcatcaaacgggaagaaacctgagaaaaaa
cggagaactctcagtctaagccacgccgatctgttcggtgatgagagtccagaggaggcc
gaaccgatggaggtggacgacgacgatgaagaggcagaggaagtgctggtgaggaagtcc
gcggacgctttaaagaggggtcgactgaacaagaggaaagcgtcagagctgactctgtct
tcgtctgaggacgaggccgactgcagccaggagggcagcagagcagataaggacgaggtt
gacggagctggaatagacttctccagtttccaggatgatctggactttgactccgatccc
atggaggagtgtttgcggatcttcaatgaatctaaggatgtgaagagggaagacaaggga
aggcaagctaagcagtcctctagggattcagatgaggacaaaggcacagagagcacttta
acaactctcttccctggtcagaagaagagagtctcccatttcgttgccaaaggaagtaat
gatgcaccttctaagtctgtggtgcggccgtacaagaggccctcggcccaggaggtttgt
taccaacgtatgcaggtggcgcagcagcaagccgctcagctttctgcttcagtcaaagcg
gtctcacatatctccagtcccagctcctctggagagaggaagagaatagcgcaccgtccc
agcccactgatgtcctcatccaaaacaacaggctctgcggatgctaaaccagccagcagt
cgagtgttaacccccaaccagacccatcaatctgtcaaggctcaaaccacagctggtatc
atgtccaagaccatgtccactgtctcacagaagagagtggctcacatgcccaccatgaag
agtacttcaatgaagcgccccgtcatccccattgagtttggagccaaagtgcccaacaac
atccgccagcgctacctcaccgccttcatagatgagtgtgtcaaattttgcccatccgac
gacattgccttccagatgggacttgacgaggagaagttggtgtatgatcgcagcaacagt
aagaacatctacctcaacgtagctgtcaacacgctgaagaagctccgcagcaagagcacc
tcctgtccctcccctgtcagcaaggagccagggtcagctgctaacaggaggatccaatcc
catgaggatgttctgggaggtcgtctggctgccacaacgagcttcactgtcaacaggatg
ggtaaacagcaagaggagaagctcatcggagccacactgtacaggaagctgaaggcgtat
ctgatgacagaggagcagctccaggagcacggttacccaagaacgaaccctgaggcctct
ggcaaggccatcatatacaacctcccagagaaaaaggccattgcagacccattcaccaag
atatgctgtcgatgtggcgctgagtataaaatcaacatcaacggcaactgtgtgcggaaa
gaagaatgtgcttttcactggggacgtctgcgcagacataaagtcgctggaggctgggaa
accatctacagctgctgcgccggggctgtgggttctcctggttgctcagttgcaaagcaa
catgttcaagatgggcgtaaagagacatttgacggctacgtctcaacgttcagtaaatct
ctaccaccagacggaaatgcaggggtgtttgctttggactgtgaaatgtgttacacaaca
cagggcctggagctgacgagggtgacagtcattgactccgaactgaaagtcatctatgac
acgtttgtcaaacctgggagcaaagtggtcgactacaacacacggttttcaggtgtgacg
gaggaggacttggagagctccaccatcaccctcagagacgttcaggcagtgcttctcagt
atgttcagcgctgagtccatcctcataggacacagtctagaaagtgacctcctggctctc
aagcttattcacagttcagtcgtagacacagccatcgtgttccctcaccgactcggctta
ccttacaaacgtgccttgaggaatctgatggccgaccacctcaaacgcatcatccaggac
aacgtggatggccatgactcgagtgaagatgcgtccgcctgcatggagctgatgttttgg
aggataaaggaggacgcaaaggtcaaaagatga
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