Scomber japonicus (chub mackerel): 128362009
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Entry
128362009 CDS
T09718
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03272
Virion - Hepatitis viruses
sjo04514
Cell adhesion molecules
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128362009 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128362009 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128362009 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128362009 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128362009 (si:ch73-61d6.3)
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Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
GEO12453p1-like
MapZ_EC1
PRP1_N
DUF6779
Motif
Other DBs
NCBI-GeneID:
128362009
NCBI-ProteinID:
XP_053178607
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All DBs
Position
7:complement(24114959..24131138)
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AA seq
543 aa
AA seq
DB search
MFDKQQYESPPVYSPPFTSPSNHGFVPPGSFHAPQSDYNAYPPPPGSYYIEEKPQHFYKW
RSPPGLVKSMMAVVVVLCVAIFACVASTLMWDIQYGYGMGTGYYGSGMGYGSGYGGGYGG
GYGGGYGGGYSNYGSSYISPYSAKTAMIAMAAINFIGALSFFIASFSKSYAVRGRKFFLA
VLVASIIMGVLQAIINIVYIVGVNPMAQGSSSMMYNPMLMMCQNLYQTGYSQMGGVGGFP
MYNQYLYHYCFVDPQEGVAMVCGFLIVIALGVAAFFAQKTRGKIWRYGKPNIYWDRPLVG
GKASEGRDVEDWVNNVEESRSIQDAPTLLVSEKGAGLLNASANSVISYPPAKVDSSSFNE
DTYDNNQYSERTTSRPSEVFSHGGRTSSSPSEETGGGRKPSANRGKRRRRNPELDESQYE
TEYTTGGETGNELDAEEWESIYPDITTDEQRHEYKREFDADLREYKRMCAEMDDINDQLN
KLSRQLDTLDESSAKYQAVAEEYNQLKDLKRTPEYQSKKKECRRLRHKLFHIKRMVKDYD
KTH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagcagcagtacgagagtccacctgtctacagtcctcctttcacctcacca
tccaaccatggctttgttccaccaggcagctttcatgctcctcagagtgattacaacgcg
tacccacctccaccggggtcctactacatcgaggagaaacctcagcacttctacaaatgg
cggtcgccacccggacttgtcaaatccatgatggccgtggtggttgtgctgtgtgtggcg
atatttgcctgcgtggcctccactctcatgtgggacattcagtatggatatggaatggga
acgggttattacggttctgggatgggctacggcagtggctatggtggtggctacggcggc
ggttatggcggtggatatggcggcggctacagcaactacggctcttcctacatttcacct
tactcagccaaaactgccatgattgccatggcagccatcaacttcataggggcgctgtct
ttcttcatcgctagcttctctaagtcctacgccgtccgcggcaggaagttctttcttgct
gtcctggtagccagtatcattatgggcgtcctgcaggccatcataaacattgtgtatatt
gtcggggtgaacccaatggcccaaggatcctccagtatgatgtacaatccgatgctgatg
atgtgccagaacctctaccagactggctattcccagatgggaggagtgggaggtttcccc
atgtacaaccagtacctctaccattactgctttgttgaccctcaggagggagtagccatg
gtgtgtggattcctgattgtcatcgccttgggtgttgcagctttctttgctcagaaaacc
agagggaagatctggcgctacgggaaacccaacatctactgggacaggcctcttgttggt
gggaaggcctcagagggcagagatgtagaggactgggtgaacaatgtggaggaaagccgc
agcattcaggacgcccctaccctgttggtgtcagagaaaggggccggactgctcaacgcc
tcggcgaacagtgtcatttcttaccccccagccaaggtggacagcagctcttttaatgag
gacacatatgacaacaaccaatactcggaaaggaccaccagccgaccatcagaggtgttc
tcccatggtggaaggaccagctccagtccttcagaagagacaggcggaggccgtaaaccc
tctgccaacaggggcaagagacgcagacgtaaccctgagctggatgagtctcagtatgag
acggagtacaccacaggaggagagacaggcaacgaactcgacgcagaggagtgggagagc
atttatccggatataacaactgatgaacagcgtcacgaatataagagagagtttgatgcc
gacctcagggagtacaagcgcatgtgtgcggagatggacgacattaatgatcagttaaac
aaactcagtcggcagctggacacactggatgagtcttctgccaaataccaggctgtagca
gaggaatataatcaactgaaggacttgaagcggacaccagaataccagtctaagaagaaa
gagtgtcgcaggctgagacacaaacttttccacattaaacgcatggtgaaggactacgat
aagacccactaa
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