Scomber japonicus (chub mackerel): 128362036
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Entry
128362036 CDS
T09718
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sjo01100
Metabolic pathways
Module
sjo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128362036 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128362036 (chsy1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
128362036 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128362036 (chsy1)
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
O-Glycan
128362036 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
128362036
NCBI-ProteinID:
XP_053178649
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Position
1:127859..203167
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AA seq
799 aa
AA seq
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MAGRSRRAWFSVLLGLVVGFTLASRLILPKATELKKAGQKRKASPAGCGLNGVLRKEYGG
VLWPPQNNGLPATEKPGSRSNHFLFVGVMTAQKYLNSRAVAAHRTWAQTIPGHVEFFSSE
GSDTSIPIPIMALRNVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKSGKLES
FLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLKRMVPHIRECL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKNPPYQYRLHSYMLSRKIADLRHRTIQLHREIVQMGRYGAAEPSREDLQLGMPPSFM
RFHPRQREEVLEWEFLTGKYLFSSSDGQPPRRGMDSSQRQALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPLYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFR
EEEEMDARALASHINKESDSLSFLSNSLKMLVPFKLATSGQEQREPKEKKVNILVPLSGR
YDIFVRFMANFERVCLMPNQNVKLLILLFSTDNNTERVKQVELMREYHMKYPRAEMEIKP
VAGSFSRALALEVGSSHFSNDSLLFYCDVDLLFTSDFLKRCRANTALGAQTYFPIIFSQY
DPKVVYAGKVPSNNHYVFTSKTGLWRNYGFGIVCVYKGDLVSAGGFDTSIQGWGLEDVDL
FNKFVQSGVKLFRSTDTGIVHVHHPVICDPNLEAKQYKMCLGSKASSHGSTQQLAELWLE
KNDHGFGRLASNNGSVRTA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaagccgaagagcatggtttagtgttctgctgggactggtggtcgggttc
acactggcttccaggctaattttacccaaagcgaccgagttgaagaaagctggtcagaaa
cgaaaagcaagccctgccggttgtgggttgaacggggttctccgaaaggagtacggcgga
gtattatggccgccgcaaaataacggtttaccggcgaccgagaaacctggttccaggtcc
aatcatttcctgttcgttggtgtcatgactgcccagaagtatctgaacagccgagccgtg
gcggcgcacaggacatgggcacagacaattccaggccatgttgagttcttctcgagtgaa
ggctctgacacctccatacccattcccataatggctctgaggaatgtggacgactcgtat
ccaccacagaagaagtccttcatgatgctcaaatacatgcatgaccactacctggacaag
tatgagtggttcatgagggcggatgatgacgtctacatcaagagcgggaagcttgagagt
ttcctgcgcagccttaatagcagtgaggcaatcttcctgggtcaaacaggcatgggcgcc
cgggacgaactggggaaactggccttagagcctggggagaacttctgcatgggggggcca
ggtgtcatcatgagccgtgaggtcctcaagagaatggtgcctcacatccgagagtgtcta
caggagatgtacaccactcatgaggatgttgaggtgggccgctgtgtcagaaggtttgcg
ggagtccagtgtgtctggtcgtatgagatgcagcagcttttctatgagaactatgaacca
aataagaagggctacatacgagatctccacaatagcaagatccatcgagccatcaccctc
caccccaacaagaaccctccctaccagtatcgcctacacagctacatgctcagccgcaag
attgcagacctgcgccaccgaaccattcagcttcaccgggagatcgtccagatggggcgc
tatggagcagctgagcctagcagagaagacctccagcttggtatgccaccctcatttatg
cgcttccacccgcggcagagagaggaggtcttggagtgggagttccttacaggcaaatac
ttgttctcatcgtctgacgggcagccaccccgccgtgggatggattcctcccagaggcaa
gccctggatgacatcatcatgcaggtgatggagatgatcaatgccaatgcaaagacacgg
gggcgggtcattgatttcaaagaaatccagtatggctaccggagggtcaatcctttatat
ggggcggagtatgtgctagatctgttgttactatacaagaagcacaaaggaaagacaatg
acagtacctgtgaggaggcatgcatacctgcagcagaccttcagccagatccagttcaga
gaggaggaagagatggatgccagagccctggccagccacatcaacaaagagtcggactcc
ctttcattcttgtccaactccctcaagatgctggtgccattcaaacttgccacatctggc
caggaacagagggaaccaaaagagaagaaagtcaacatcttggtacctctgtcaggacga
tatgacatctttgtgcgcttcatggccaactttgaaagagtttgtctgatgcccaaccag
aatgtcaaattgctgatcctgctcttcagtacagacaacaacactgagcgggttaagcag
gtggagctgatgagggagtatcacatgaaatatccccgggctgagatggagataaagccc
gtcgctggctccttctccagggctctggctttagaagtggggtcatcacatttcagtaat
gattcactgctcttctactgtgatgtggacctgctcttcaccagcgacttcctcaagcgc
tgccgggccaataccgctcttggggcacagacctatttccccatcatcttcagccagtac
gacccaaaagtggtgtatgcagggaaggtccccagcaacaaccactacgtcttcacctcc
aagacaggcctgtggaggaactacggctttgggatcgtctgtgtctacaaaggggacttg
gttagcgctggaggctttgacacctccatacaggggtggggattggaggatgtggacctc
tttaataaatttgtccagtcaggggttaagttgttcagaagcacagacacagggatagtg
catgtccaccacccagtcatatgtgatcccaacctggaggcaaagcaatataagatgtgc
ctgggctccaaagcctcgtcgcacggctccacccaacagctggccgagctctggctggag
aagaacgaccacggcttcgggagactggccagcaataacggctcagttaggacagcgtga
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