Scomber japonicus (chub mackerel): 128362044
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Entry
128362044 CDS
T09718
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128362044 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128362044 (efl1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Pre-60S particles
GTPases
128362044 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128362044
NCBI-ProteinID:
XP_053178661
LinkDB
All DBs
Position
1:complement(1701197..1825547)
Genome browser
AA seq
1136 aa
AA seq
DB search
MGHTSLEKIIALQKNPAHIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQLRGITMKSSAISLHYNEGDQDYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLIMELKLTSQEAFTHLQKILGQVNAVTGTL
FTSKVLEDRAEKEKEEVKEKESEPSSGDQVYDWSAGLEEVDDSNLYFYPDQGNVVFASAI
DGWGFSIRQFAHIYSQKMGIKAEVLLKTLWGDFYLNAKAKRIMKGAQAKGKKPLFVQLVL
DNIWSLYDAVVTRRDKEKVDKMVSSLGVKVMARDSRHSDPKVLLSAICSQWLPVSQAVLS
MVCEKLPSPLDMAAERVEKLMSVGARRFDSLPRQTQELKKAFLQCSSEENAPVIVFVSKM
FAVDTKVLPQNRQRPLTQEEIAQRRDLARQRHADRMAAGQPAETTENNRDPIQSGSTAQE
GQSAGAITAKMESLIVRESKPEEEEEQKETFIAFARVYSGVVKKGQRVFVLGPKYDPALG
MSMLPEGCSASDCASEVPHMSCCSMESIYLLMGRELDELEEVPAGNVLGIGGLGECVLKS
ATLSTSPACPPFTPLNFEASPIVRVAVEPKHPSEMPKLVRGMRLLNQADPCAEVMIQETG
EHVLVTAGEVHLQRCLDDLRERFAKIEITASKPIIPFRETVVRPPKVDMVNEEMGKQQKL
AIIHQVKDEVSQGRSSDNFHVDPTGLVTLTTPNRLATVSVQAIPLPQEVTSLLESSSELI
RTLEQINMSLREGKNLEVSPRTLEAITEFKAKLESLLQGRKWRNAVERIWAFGPRRYGPN
ILLNSVEGYQRPSLWQFLGKGEKAGEAGSQAPVLRDFDNSIVSGFQLATLSGPMCEEPLM
GVCFSVVRWDIQSSAPLQHQVSLEEHLTSHEALADSKTGGGSETSAQAEGAAVESSQARR
RPEATSLDCYGPVSGQLIAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLG
KREGQVLHEEMKEGTDMFLIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSNP
YWVPTTEEEYLHFGEKADSANQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagcctggagaagatcatagcactgcagaagaaccctgctcacatcaga
aacctgtgtattctggcacacgttgaccatggtaaaactactctggcagactgcttggtg
gcgagtaatggtatcatatcaagtcgactggctgggaagctgaggtatctggacagcagg
gaggatgaacagctgagaggaatcaccatgaagtccagtgctatctctctgcactacaat
gaaggagatcaggattatttactgaatctgatcgactctcccggtcacgtcgacttctcc
tcggaggtctccactgctgtccggctgtgtgacggagccattgttattgtcgatgctgtg
gaaggagtgtgtccacagactcaggtggtgctgcgtcaggcatggctggagaacatcagg
cctgttctggtcatcaacaagatagaccgactcatcatggagctgaagctcacctctcag
gaagctttcacacacctgcagaagatcctgggacaggtcaacgcagtgactggaaccttg
tttacatccaaagtgctggaggatcgagcagagaaagagaaggaggaggtgaaagagaaa
gagagtgagccgtcgagtggagatcaggtgtatgactggagcgccgggctggaagaggtg
gatgactccaacctctacttctatcctgaccagggaaatgtggtgtttgccagcgccatc
gatggatggggcttcagcatccggcagtttgcccacatctacagccagaagatgggtatc
aaagcagaggtgctactcaaaaccctgtggggggatttctacctcaatgcaaaggcaaag
aggatcatgaagggtgctcaggccaaaggaaagaagccactgtttgtgcagctcgtgctg
gataacatttggagtttatatgatgctgttgtcaccaggagagacaaggagaaggtggac
aagatggtgtcatctctgggggtaaaggtgatggccagggactcccgtcactctgacccc
aaagtcctcctgtctgccatctgcagccagtggttacctgtttcccaggctgtcctgtca
atggtgtgtgagaagcttcccagcccgttagacatggcagcagagagggtggagaaactg
atgagtgttggagcgagacgatttgactccctgcccagacagacgcaggaactgaagaaa
gcgttcctccagtgctccagcgaggaaaatgctccagtcatcgtctttgtgtccaagatg
tttgctgtggacaccaaagttttgcctcagaacagacagaggcccttgacacaggaggag
atcgcccagcgtagagacctggcaagacagagacatgctgacaggatggcagctggtcag
ccagcagagacaacagagaacaacagagaccccatccaatcagggagtacagcacaggaa
ggccagtctgcaggagccatcacagctaagatggagagtctgatagtgagagagtcaaaa
ccagaggaggaagaggagcagaaggagaccttcatagcatttgccagggtctacagcgga
gtggtcaagaaaggacagagagtgttcgtattgggaccaaagtacgacccggccctgggc
atgagcatgctgccggagggttgcagtgcttcagactgcgcctctgaggttcctcatatg
tcctgttgttccatggaaagcatttacctgttgatgggcagagagctggatgagctggag
gaggttcccgctggaaatgtgctaggtatcggtggtctgggggagtgtgtgttgaagtca
gccaccttgtccacctctcccgcctgtccacccttcaccccactcaactttgaggcttcg
cccattgttcgggttgctgttgagcccaaacacccaagtgaaatgccaaagctggtacgt
gggatgcgtttattgaaccaggcagatccctgtgctgaggtcatgatccaagaaacagga
gaacatgttctggtcactgctggagaggttcatctccaacgctgcctggatgacctcaga
gaacggtttgctaaaattgagatcactgcgtccaaacccatcattccatttagagaaaca
gtggtacgtcctccaaaggtggacatggtcaacgaggagatgggcaagcagcaaaaactc
gccatcattcaccaggtgaaagacgaggtctctcagggtcgctcatctgacaatttccat
gtggatcccactggtctggtgaccctcaccactcccaacagactggccactgtcagcgtc
caggcaatccccctgcctcaggaggtgaccagtctgttggagagtagttcggagctgatt
cggactctggagcagatcaacatgtccctgagggagggaaagaatctggaagtcagcccc
aggaccctggaagccatcactgaattcaaggccaagctggagagcctactgcaggggagg
aagtggaggaatgctgtggagcgtatctgggcctttggacctcgcagatatggtcctaac
attctgctgaacagcgtagagggctaccagcggccctctttgtggcagtttttgggcaag
ggagaaaaagctggtgaggctggatctcaggcccctgttctacgagactttgacaacagc
atcgtcagcggcttccagctagcaaccctgtcggggcccatgtgtgaggagcccctgatg
ggagtttgcttttccgtagtgagatgggacatccagtcttcagctccactacagcatcag
gtctccttggaggaacatctgacatcccatgaggctttagcagacagtaaaacgggagga
ggcagtgagacatcggcacaggcggagggtgcagcggtagagtcgagccaggctagacgg
aggccagaggctacctctctagactgctatgggcctgtctcgggccagctgatcgctgcc
atgaaggaggcgtgccgtcacgcctttcaggctcagccccagagactcatggctgccatg
tatacctgtgagatcatggccaccgctgaggtgctgggtcgagtatatggcgtcctgggg
aagcgagagggtcaagtcctccatgaagagatgaaggaggggacagatatgttccttatc
aaggccgttctgcctgtcgctgagagtttcggatttgccgacgagatccgcaagaggacc
agcggattggccagtccacagctggtcttcagccactgggaggtgatcagcagtaatccg
tactgggttcccaccaccgaggaagagtatctgcactttggagagaaagccgactcggcc
aatcaggctctgaaatacatgaacgctgtgcgccgccgcaaaggcctgtatgtggaggag
aagatagtggagcacgcagagaaacagagaacactcagcaagaacaagtag
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