Scomber japonicus (chub mackerel): 128362047
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Entry
128362047 CDS
T09718
Symbol
grin3bb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128362047 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128362047 (grin3bb)
04082 Neuroactive ligand signaling
128362047 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128362047 (grin3bb)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Glutamate (ionotropic)
128362047 (grin3bb)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
ATG16
Motif
Other DBs
NCBI-GeneID:
128362047
NCBI-ProteinID:
XP_053178660
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All DBs
Position
7:35716186..35805039
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AA seq
1203 aa
AA seq
DB search
MTFTSSSSSSSRTPGAFLLLQLLLVQPCLLHPQPCHLLAQIGHSVRVGALLPAQRTARVQ
VQAALSRAAAALHEDNFLPYNLSLELVPRQPAAADPESLFRCACEGVVVQGVTAVLAFPQ
SREELLHVDFMSSFLEIPFISVMEHEEPLDTQNRFHLQMVTGVPESALSELLLTVLRRSG
WREATAVLCEGWEEAQGLLQLLDGRSGASWDGGGGVTWRLRALLNLTQSAHDDTQIHDFL
SRHFRAAQAPPASVLLFGADPQCAAAVLRSAQDLGLTLPMMHWVLGQPLSPDALHAIGLP
LGLLAYGEVGRKPLDFYIRDALQLVARAVAAATVVRPDLALIQNMVNCYDKPNKHELPSS
GQYLSRFLSNTSFSGLTGPVRVHQNRSRVVTSQRFHIWSLRRDALGQPTWVTVGSWEGGQ
LHVEDQGVWQGPRPRYRTEGTGGRRGGRWRAGMPAAGSRVRVVTLVEHPFVFTRDADDEG
TCPAGQFCLDAETNSSDTLERLFREVAAGNGSFLPAEYSKCCYGYCIDLLEKLAEDMGFE
FDLYIVGDGKYGAWKGGRWTGLVGDLLQGLADMAVTSFSINSARSRVIDFTSPFFSTSLG
ILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRVRVF
SYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTF
EEVTGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPEGVATLKT
DPPQLDAFIMDKALLDYEVSIDADCKLATVGKPFAIEGYGIGLPQNSPLSSNISEFISRY
KSEGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFVLLCVGVGGALLTLAGEHG
FYRLVLPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKKQRAEKEKSCNLQKAPPPSGPPA
PPPPGASAKWNNEISKDEAAAAAAAADNRDFKRVHFNLETLNTRRLLARMASDSKAGGAK
GDGGAKGEGEGEGPARPKAAPASRQCENGGPAASLASLVLSLPSSSSSSSSTRLNSSSAP
PAAPSAPPAPIAPPQPGELQELQEQIEQMREKLKTALARRAEIQTSLTKPVATVTANNPT
AVVTTTTTSVTITTTSTSVAPPTVTTVTALPANTKCVTTMTDPPHKVLSKVRPLPRRLTN
ERR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgactttcacctcctcctcctcctcctcgtcccggacacctggagccttcctcctcctg
cagctcctcctcgtgcagccgtgcctcctccacccgcagccgtgccacctcctggctcag
atcggacactcggtgcgcgtgggtgcgctcctcccggcgcagcggacggctcgcgtgcag
gtccaggctgcgctgagtcgcgcggcggcggcgctgcacgaggacaacttcctgccctac
aacctgagtctggagctcgtgccccggcagccggccgccgcggacccagagtctctgttc
cggtgcgcgtgtgagggcgtggtggtgcagggagtcaccgccgtgctcgccttcccgcag
agtcgcgaggagctgctgcacgtggacttcatgtcctcgttcctggagatcccgttcatc
agcgtcatggagcacgaggagccgctggacacacagaaccggttccacctgcagatggtg
acgggggttccagagtcggctctgtctgagctgctgctgacggtgttgcggcggtccggc
tggcgcgaggcgacggcggttctgtgtgaaggctgggaggaagcgcagggtctgctgcag
ctgctggacggccgcagcggtgcatcatgggacggcggcggcggcgtcacctggcgtctg
cgcgctctgctcaacctgacgcagtcggcacacgacgacactcagatccacgacttcctg
tcccgacacttccgggcggcccaggcgccgccggcctcggtgctgctgttcggagccgac
ccgcagtgcgcggcggcggtgctgcggagcgcccaggacctgggcctcacgttacccatg
atgcactgggtgctgggccagccgctcagccccgacgcgctgcacgccatcggcctgccg
ctcggcctgctggcctacggagaggtgggacgcaaaccgctcgacttctacatcagagac
gccctgcagctggtcgccagggccgtcgccgcggcaaccgtggtgagaccggacctggct
ctgatccagaatatggtgaactgctacgataaacccaacaagcacgagctgccgtcatca
ggacagtacctgtccaggttcctgtccaacacgtccttctctggtctgaccggtccggtt
cgtgtccatcagaaccgttctcgtgtcgtcacctctcagcgtttccacatctggagtctc
cgccgggacgctctgggtcagcccacctgggtgacggtgggcagctgggagggggggcag
ctgcacgtggaggaccagggtgtgtggcagggcccccgtccccgctacaggacggagggg
acgggcgggaggcgcggggggcgctggagggcgggcatgccggcggcggggagccgggtg
cgcgtggtgacgctggtggagcatcccttcgtcttcacccgggacgccgacgacgagggg
acgtgtcccgccgggcagttctgtctggacgcggagaccaacagctcagacactctggag
cggctcttccgcgaggtggcggccgggaacggcagcttcctgcccgccgagtacagcaag
tgttgctacggttactgcatcgacctgctggagaagctggcggaggacatgggcttcgag
ttcgacctgtacatcgtcggggacgggaagtacggcgcctggaaggggggccgctggacg
gggctggtgggagacctgctgcagggcctcgcggacatggccgtcacgtccttcagcatc
aactccgctcgcagccgcgtcatcgacttcacctcgccgttcttctccaccagtctgggc
atcctggtgcgcagcaaggacacggcggctcccatcggcgccttcatgtggccgctgcac
tggtccatgtgggtcggcatcttcgtggcgctgcacatcacggcgctcttcctcacgctg
tacgagtggaagagtccgttcgggatgacgcctcacggacggaaccgcgtgcgcgtgttc
tcgtactcgtcggcgctgaacctctgctacgccatcctgttcggacgcaccgtttcctcc
aagacgcccaaatgctggacgggtcgcttcctgatgaacctgtgggccatcttctgcctg
ctggtgctgtccagctacaccgccaacctcgccgccgtcatggtgggagagaagaccttc
gaggaagtgacggggatccacgacgcaaagctgcatcacccctctcagggtttccggttc
gggacggttcgtgagagcagcgccgaggattacatgaagaagagttttccagagatgcac
gaatacatgcgacgcttcaacgaaccgacgacgcctgaaggggtcgcgaccctcaagaca
gatcctcctcagctcgatgccttcatcatggataaagctctgctcgactacgaagtttcc
atcgacgccgactgtaaactggcgactgttgggaaaccgttcgccatcgaaggttacggc
atcggcctcccccagaactccccgctgagctccaacatctcagagttcatcagcaggtat
aagtcggagggctacatggacctgctgcacgataaatggtacaaagtggttccatgtggg
aaccgagtgttcgccgtcaccgagactcttcagatgggtatcagtcacttctcgggcctc
ttcgtgctgctgtgtgtaggagtaggaggagctctgctgactctggcaggcgaacacggt
ttctacagactcgtcttacctcacatccgccgccggcagaacctcaagtactggctgcac
acctcacagaaaatccaccgagctctgaacatgacgtacgaggacgtgaagaagcagcgc
gccgagaaagagaaaagctgtaacctgcagaaggctccgcccccctcgggcccccccgcc
ccgccgccccccggagcttcggccaagtggaacaacgagatcagcaaggacgaagctgca
gccgccgccgccgccgcagacaaccgggacttcaaacgggtccacttcaacctggagact
ctgaacactcgccgcctgctggcacgcatggcctccgacagcaaggcggggggggccaaa
ggggatgggggggccaagggggagggggagggggaggggccggcccgaccgaaggcagcg
ccggccagcagacagtgtgagaacggaggaccggcggcttcattggccagtctggttctg
tctctcccctcctcttcctcctcttcctcctccacccgcctcaactcctcctccgccccc
cctgcggccccctcagccccccccgcccccattgcccccccgcagcccggcgagctgcag
gagcttcaggagcagatcgagcagatgagagagaagctgaagacggctctggccagaaga
gccgagatccagacgtctctgaccaaacccgtcgccacggtgacggcgaacaatcccacc
gctgtcgtcacgacgacgacgacatcagtgacaattacaacgacgtcgacgtcggtagcc
ccgccaaccgtcaccacggtaacggccctccccgccaacacaaagtgcgtgacgaccatg
acggacccgccgcacaaggtgctgtccaaagtgcggcccctcccccgcagactgaccaat
gagaggaggtga
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