Scomber japonicus (chub mackerel): 128362054
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Entry
128362054 CDS
T09718
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128362054
03037 Cilium and associated proteins [BR:
sjo03037
]
128362054
Transporters [BR:
sjo02000
]
Other transporters
Pores ion channels [TC:
1
]
128362054
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128362054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
128362054
NCBI-ProteinID:
XP_053178672
LinkDB
All DBs
Position
1:2408702..2448997
Genome browser
AA seq
1174 aa
AA seq
DB search
MSTVSEPLVGSRSAAKRHKSIRKNSRRIYSAYQDHHQGFSDDEDKEDERVDSNDPEEMFQ
NIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKLSRV
LYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAGA
PFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLAYFL
VGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGAAI
VNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEKQ
ELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLII
ALLDKVNSMSSAIPVSPGNWSDSSSFLATISQPEVDSLSTLMSEISVSEHRNSTVATITT
VLDVTNSSRSSSGTVTNQTALFEKNTRSQQDQCWETYVGQEMLKLSIIDMIFTVASILLI
DFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNV
LKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSQ
HCGPFSGQEKIYDIISETVASDFPMWFSKVMSYITSPVVVLPALLLLFMLIYYLQSIARS
LKFTNNQLRMQLQTERTEDKKKVFQMAAARLQAPEAAADKKPDQQESDITSQEASIHTPS
PRRNGSVTNFQSPVRRGNSIRTITQSASRMDLNRGSGAGASRSPTVSILPKHRLEHIPNS
RPPPFLGGPSGSCRSKSYHHMAYNPPARYSDIHSDPLYRKTTCSIHPVEAASIITAQSYG
GRRGHTTRYVIVNEREPRKKLLRSATRIPRHYLMEEPAEILELYPRNIKRYTARTAHHQP
HPHRSHPSEQHLSEEEEEEEEEGKGRRRMSLGKTHRPRSLSDLHQSAHFYIGECGEGHMS
VAKDSHAARGRYAAQEEDEEEDGEGEMDWRDIESHSRSQANVRGADSLLVRTRRRIHSPG
RHCQSPAKNRHMESYVKPKTKPKLDPSLTESDSASLASSSDQQNSSTDQYIQVIHNKERY
LKSDTRQGKLGKKKSKTSFDLNVSESNDLVCSNV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtgtctgagcctctggttggcagcaggtctgcggccaagagacacaagagt
atcaggaagaactccaggaggatttattcagcctaccaggaccaccatcagggcttctct
gatgatgaagataaagaggatgagcgggtggacagcaatgaccctgaggagatgttccag
aacattcagtaccagaaggagatcatcgccaacattcgaaccagaccctggccaatgaga
cgcaagctcaaagtcttaaagcaggctagagagattgttctgaagtacgagggccgactg
accagaaccagaggttaccagacagcaggagctgatctgctgaagaaactgtcccgtgtg
ctttacaacattgtggtcctgttcattccctgggaagtgaggatcaagaaaattgaaagt
cactttgggtccggcgttgcctcttacttcatctttcttcgctggttgtttgggatcaac
attgtcctcaccatcatgactggagccttcatcgtcctaccagagctgctggctggagct
ccgtttggaacaacaaggagtaaaacgatccccaaggagcacctggcttcagcccaggac
ctagacaccatctggtctcttgggggctacctgcagtactctgtgttattctatggatac
tatggaagagtgaggaagattggcagcgcagggtaccggttgcccctcgcctacttcctg
gttgggatggcagtgtttgcctacagtttcatcatcctgttgagaaaaatggccaagaac
tcacgtctgagcttggccagcgcctctgatgagaacttcacattctgctggagggttttc
tgtgcctgggattacctgataggaaacccagaggctgcagagagcaaaggagctgccatc
gtcaacaacatcagggaagccattgtggaggagcaggaaaagaagaaggataccagtctg
gccgttctgatcagcctgcgtatcttagccaacatcctggtgctgctgtctctggccggc
agcatctacatcatctactttgtggtggaccgttctcagaaactggagcaggagaagcag
gagctgacgctgtgggagaagaatgaggtgagtgtggtggtgtctctcatcaccatgata
gctccgtctgcctttgagctggtggctcagttggagatgtatcacccacgaacatcactg
cgattccagctggccagagtgcttgttttatacctggggaatctctacagcctcattatt
gctctccttgataaggtcaacagtatgagctctgctatcccagtgagtccaggcaactgg
tctgactccagctccttcctggccaccatctcccagccagaggtggacagtctgtctacc
ctgatgtctgagatctctgtctccgagcatcgtaacagcaccgtagcaaccatcaccacg
gtgctggatgttaccaacagcagtaggagcagctcagggacagtgaccaatcagacagct
ctatttgagaagaacacgcgctctcaacaggaccagtgctgggagacttacgtgggacag
gagatgctgaagctgtccatcattgatatgatcttcacagtagccagcatcctgcttatt
gacttcatcagaggtttggtggttcgctacctgagtgactgctgctgctgggatttagag
agcaagtttcctgaatatggagaattcaaaatagctgagaatgtcttgcatctgatttat
aaccaagggatgatctggatgggagcttttttctctccttgtcttcctgcctttaacgtg
ttgaagctgattggtctgatgtatttgagaagctgggctgtcctcacctgtaatgttccc
catcagcaggtgttcagagcgtccagatcaaacaatttctacttggctatgctgcttttc
atgctgtttctgtgtatgctgcccaccatctttgccatagtgagatacagaccatcacag
cactgtggaccattcagtggtcaagagaagatttatgacatcatctctgagacagtggcc
agtgacttccccatgtggttcagtaaagtgatgagttacatcaccagtccagtcgtagtg
ctgccagcactgctgctgctgttcatgctgatatattatctccagtccattgccagatcc
ctcaaattcaccaacaaccagctgaggatgcagctccagactgagcgcactgaagacaag
aagaaagtcttccagatggctgcagccagactccaggctccagaagctgcagcggataag
aagccggatcagcaggagagcgacatcacaagccaggaggcctccatccatactccgtct
ccacggcgaaacggcagtgtcacaaactttcagtctccagttcgtcgcggcaacagcatc
cgcaccatcacccagtcggcatccaggatggacctgaacagaggaagtggagctggagcc
tccagaagtcccacagtgtccatactgcccaaacacaggctggagcacattcctaacagc
aggcctccaccatttcttggtggccctagtggttcctgcaggtccaagtcttaccaccac
atggcatacaatccaccagcccgctattctgacatccactctgaccccctatacaggaag
accacatgctccatacatcctgtggaagctgccagtatcatcactgcacagagttacggg
ggacggcgtggtcacaccacccgctacgtgattgtcaacgagcgtgagcccaggaagaag
ctgctgcgctcggccacgcggatcccacgccactaccttatggaggagccggcagagatc
ctggaactgtacccacgcaacatcaaacgctacacagctcgcaccgcccaccaccaaccc
catcctcacagatcccacccgtcagagcagcatctgagcgaagaagaagaggaggaggag
gaagagggaaaaggtaggaggaggatgtcgctggggaagactcatcggccccgttctctc
tctgacctccatcagtctgcacacttctacattggtgaatgcggagagggtcacatgtcc
gtggctaaagacagccacgcagctcgaggaaggtacgcagcccaggaggaggatgaagag
gaggatggtgagggagaaatggactggcgagatatagagtcacactcccggtctcaggcc
aatgtaagaggagcagactctcttctggtgcgaaccaggcgtcgcattcattctccagga
agacactgtcagtcccctgccaagaacaggcacatggaatcttatgtgaagcccaagacg
aaaccaaagcttgatccctctctgactgagtcagattcagcctctttggcctccagcagt
gaccagcagaacagcagcactgatcagtacattcaggtcatccacaacaaggagcgctat
ctcaagtctgacaccaggcaaggaaagctgggcaaaaagaagtccaaaaccagctttgat
ttaaatgtctctgagtcaaacgaccttgtctgctccaatgtatga
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