Scomber japonicus (chub mackerel): 128362109
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Entry
128362109 CDS
T09718
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128362109
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
128362109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
128362109
NCBI-ProteinID:
XP_053178741
LinkDB
All DBs
Position
7:complement(10347353..10372502)
Genome browser
AA seq
1528 aa
AA seq
DB search
MATKEITAYGFVSVSKDITDSIRKIIDKTSIKFVRGIKLDTKNGKTEDRVLVLTTWRLYF
LPPKVPAKVETTFNFLEIRALNSHPEHQVIIDTDKSSFTLRFEAREHLNHVVSHINFALS
RIFNNSIFAPSICHSDSDLSEGSRKYSPSSETSVETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLLDFSHLESRDLAVIVASMAYNTWFTKLYCKDLRIGSEVTE
QVLHTVSKSSSLEEITLENAGLKSDFPQKMSAALSENPASVIHSLNLAHNSLDNQGVSNL
IQQVCRLSKGLRLLNLSKTSLTSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGVLSGEDA
SNLYLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSFLNLSKNSFSHRKVKDTLP
LFRQFFSSAFSLTHVSMASMKLPPDVLRAVLTGLTSNPHINDLHLDISGCELRSAGAAVI
QELFPRVSSIGTLDISDNGLDADLLTVLPALSRHPSLKHLHLGKNFNIKNRVLDEVLQKL
VQLIQEEECALQTLSLSDSRLRSRGTVLVNALGSNTCLRKVDLSGNNMDDIGAKMLSKAL
QINTTLRSVTWDRNNTSAAGFLDVARALEHNFTLQYMPLPLSDISQAHRSAPERTEQALT
KIQRSLVRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLCVRVQQQVCILRGVGEMEEIQ
AAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDSLAGELAKAADKELQVIVDSMVS
LCRELCPLSSSAAERLSPTLSSVSERVSIPRSAIRTALMERAAQDIHRALEEVKLSVVSY
LTNSIVDQILQELYATHKTLTRQVSHLKHWEGSGEDGTGWRFNRHRDSLDITDEELSTSI
DTIAIKKHSSRTRRIRPVSTRLSLCDDSSSSPPPSVPSYSSPLSRSASWEGLSELPTQGL
PLHHVTRVRPRPPRRHKGGHIPAETHCSENGGISPLDDGLPDFYTKRVLPDSQLSSLHKA
HSLRRKKRRNMLAIFGFRKKRNQTLSNQATESEAEVYGDGCHTVATAPTGTATENVYTLL
QPPRSAARAGSPGEGAEGKNTLVLSPPPVPGIPHPGMGGIKHPFYSPREKSEADALLEQS
EEVNRYWADDKQRTTDVLQEDKPWLEGRQCDQHVERQRLDDRLQERTFGETRTTDRHRTE
SRHPDRHMDKQWTVDRHTQRQIDRKIERQWMGGRQIDRSWSENRPTDRQTDQWTESRHSS
RKSDRQVQALHLAQRPLPPYPSDRTPSPKQETDPLKSMEAASADWHQSQQDSPGERQACL
DAGGVLTEGWKGGAGGGASAGRAAPCASKPDPPPQSSKPNLSKLRQKHWLENSEVLPGTE
EERDTERDPGKMEKREREKRRDSEGHPPPIPEKPKTSSYVAFSKESANERNLPPPPVPPP
VSRPVHGLPDRAASQGDEGLRPQAPVKPQRNRKAMSCDTGTDRESPNNVEKPPNRKPPVK
KPRLPQNRNKSLDLSDSINSASGHSELL
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaggagatcactgcatatggtttcgtgagtgtgagcaaggatatcacagac
agcatcagaaagattatagataaaacatctatcaagtttgttcgtggtattaagcttgac
accaaaaatggcaaaacagaggacagagtactggttctcacaacatggcgcctttatttc
ctgccaccaaaggttcccgctaaggttgaaactacattcaacttcttggagattcgagct
ttgaattctcaccctgaacaccaggttattatcgacactgacaagtccagcttcaccctg
aggtttgaggcgcgggaacacctcaatcatgtggtcagccatattaatttcgcactgtct
cgaatattcaacaactccatttttgccccctccatctgtcattcagacagcgacctttct
gagggcagcaggaagtattcacccagctcagagacttcagtggaaacccagagggcctgt
ggaggcttctccgagacctacgccgctctgtgcgactataatggcatcagctgcaaggag
gaagtgcagtgggatgtggacaccatctatcactcacaggacaaccgagagtttaacctg
ctggacttcagccaccttgagagcagggatttagcggtgattgtcgcatcaatggcatac
aacacgtggttcactaaactgtactgcaaagacttacgcatagggtcagaggtcacggag
caggtcctgcatacagtcagcaaatcctccagccttgaggagatcactctggagaatgct
gggctaaaatcagacttcccgcagaagatgtcagctgctctttcagagaatcctgcttct
gtcatccactcactcaacttggcccacaactcactggacaaccaaggtgtgtcaaactta
atccagcaggtgtgtcgccttagcaagggacttcgcctcctcaacctctccaagacctca
ctcacctccaaaggggtagtgtctctatctcaggctctgtgctccagtgatgagtactcc
aactccctcctgcacctggacctgagcaagaacccaggcgtcctctcaggggaagatgcc
tcgaacttgtatctcttcttgtctcagcccaactgcctggttcacttagatctatcaggc
actgattgctctgtggactcactatttggggctcttctgagggggtgttgcgctgatctc
tcttttctgaatctttccaaaaactccttctcccacagaaaagtgaaggacacgctgccg
ttgttccgtcagttcttcagctcggccttcagcctcactcatgtcagcatggcctctatg
aagctgccccctgatgttctcagggctgtcctaacagggttaacctccaatcctcatatc
aatgaccttcatctggacatcagtggctgtgagctaaggtctgcaggggctgctgtaatc
caggaactcttccccagagtctcctctattggcactctagatatctcggacaatggtctc
gatgcagacttactcacagtcctgccagctctctcccgacacccctccctcaaacacctt
catctcggcaagaacttcaacatcaaaaacagggttctggatgaagtcctgcagaagctg
gttcagctcatacaggaggaggaatgtgccctgcagactctgtccctgtctgactcacgc
ctgcgctctcgaggcaccgtgctggtcaacgctttgggcagcaacacctgcctgcgaaaa
gtggatctgagcgggaacaacatggacgacatcggagccaagatgctgagcaaagccctg
cagatcaacaccacgctaaggagtgtgacatgggatcgcaacaatacctccgctgcagga
tttctcgatgtggcccgagcacttgaacataatttcaccttgcagtacatgcctctaccc
ctaagtgacatcagccaggcgcaccgaagcgccccagagaggacagagcaggcactgacc
aagatccagcgttctctggtgaggaacaatcagacccagcgcttctctcagaggcaggca
ctgaggctgcatcaaggcctggtcacgagcactgctgaacaggtgatggagcgcctctgc
gtgcgtgtccagcagcaggtgtgtattctacgaggtgtcggagagatggaggagatccaa
gccgctaagcaagtgctaaaagaggccaggaactcccgcgctctctacccttcactgtgc
gagttggcacatgtgctgtctgtggacgggccagtgaggcagaggctggattcgcttgct
ggtgaactcgccaaagctgcagacaaggagcttcaggtgatcgtcgactcaatggtgtct
ctctgtcgtgagctatgtcctttatcttcgtctgcggcagagcgactgagtccaacactt
tcgtctgtctcggagcgtgtgtccatccctcgctctgccattcgcactgccctgatggaa
agagcagctcaggacattcaccgagccttagaagaagtgaagctgtcagtggtttcttat
ctcaccaactccatcgtggaccaaatcctgcaggaactttacgccacccataagaccctt
acccgacaggtgtctcatctaaaacactgggagggatcaggtgaggacggaacaggctgg
aggtttaacagacacagagactctctggacattacagatgaggagctcagcaccagcata
gacacaatagccattaagaagcacagctcaagaacaagacgaatacgacctgtctccacc
agactgagcctgtgtgatgactctagctcctctccgcccccctctgtgccatcgtactcc
tcaccactatcccgctctgcatcctgggagggcctgtcagagctgcctacgcagggtttg
cctctccatcatgtgacaagagttcggccgaggcctccacggaggcacaaaggagggcat
atccctgctgagacacattgcagtgaaaatggaggaataagccctcttgatgatggactc
ccagatttctatactaaaagagtccttcctgatagtcagctctcctctctgcacaaagcg
cattcactgaggaggaagaagaggagaaacatgcttgccatcttcggtttccgtaaaaaa
cgcaaccaaactctgtccaatcaggcaacagagtctgaagcagaggtttatggagatgga
tgtcacactgttgccacagcaccaacagggacagccacggagaatgtatacaccctcctt
cagcccccaaggtctgctgccagagctggatctcccggcgagggggctgaggggaagaac
actcttgttttaagtccgccgccagtgccaggcattcctcatccaggcatgggaggaatc
aaacatcctttttactcccccagagagaaatctgaagcagatgctttacttgaacagtcg
gaagaggtaaacaggtactgggcagacgacaaacagaggacaacagatgtgctgcaggaa
gacaagccgtggctggaagggaggcagtgtgatcaacatgtagagaggcagcggttagat
gacaggctacaagaaagaacttttggtgagacgagaacaaccgacaggcaccggaccgag
agcagacatccagatagacacatggacaaacagtggactgttgaccgacatacccagcgg
cagattgacagaaagatagaaagacagtggatgggtggcagacagatagacaggtcgtgg
tcggagaacaggccgacggacagacagacggatcagtggactgagagcagacattcaagc
agaaagtcagatagacaagtccaggcgctccatttggctcaaaggccgttgcctccgtac
ccatcagacaggacgccttcaccaaaacaggaaacagatcctctgaaaagcatggaggca
gcatctgcagactggcatcagagtcagcaggactcaccgggagagagacaggcatgtctg
gatgctggaggagtcctcacggaaggatggaagggcggcgcaggaggaggtgcctctgct
ggacgagctgctccctgtgcatctaaacctgatccccctccgcaaagcagtaaacccaac
ctttccaaactgaggcagaaacactggctggagaactccgaagttctaccgggtacagag
gaggaaagagacacagagagggatcctggaaaaatggaaaagagagagagagagaaaaga
agagattcggagggtcaccctcctccgattcctgagaagccaaagacatcctcgtatgtg
gctttttcaaaagaatcagctaatgagaggaacttgcctcctccacctgtgccgcctcct
gtcagcaggcctgtgcacggactgccagacagagctgcaagtcaaggtgatgaaggattg
agacctcaggcgcctgtgaaaccacagaggaacagaaaggcaatgtcttgtgacacaggc
actgacagggaaagccctaataacgttgagaagcccccaaatcgcaaaccccctgtgaaa
aaacctagactaccccaaaacagaaataagtcactggacttgtctgacagcatcaactca
gcgtctggccacagcgagctgttgtga
DBGET
integrated database retrieval system
