Scomber japonicus (chub mackerel): 128362142
Help
Entry
128362142 CDS
T09718
Symbol
notch2
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128362142 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Ank_2
EGF_CA
EGF_2
Ank
Notch
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
128362142
NCBI-ProteinID:
XP_053178787
LinkDB
All DBs
Position
7:complement(13728773..13774837)
Genome browser
AA seq
2551 aa
AA seq
DB search
MEPIPGLSSGKSLVFVFCFIQLSLALQCVDNKAPCVNNATCLTFSNGTGYCRCAPGFLGE
YCHHKDPCHPGYCLNGGNCSVSMSAGVPVPGSASCTCPLGYTGPHCQTPQNSTCYPNNPC
ANRGVCTLLPLDKYTCECARGWTGLRCEHEDSCLSSPCANGGKCSSLSGSSYTCSCPPGY
TGLRCLNDTDECAATPSVCQNEGMCVNTPGSYKCICAPGFTGRHCESSYIPCSPSPCLNG
GTCHQNSETSYSCHCLPGFNGTNCENNIDDCPGHQCANEGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLFGGYVCVCVNGWSGPDCSENIDDCATASCGPGSTC
IDRVASFLCLCPHGKTGLLCHRDDACISNPCREGSQCDTNPISGMFNCNCPPGYVGSTCN
IDRDECSIGTNPCEHGGLCVNTDGSFTCNCVRGYSGPRCEQDINECASNPCQNDGTCLDR
IGDYTCICMPGFGGTHCEIEVNECLSSPCLNQGKCLDQVSRFVCECPAGFSGEMCQIDID
ECSSTPCLNGAKCIDRPNGYDCECAEGFTGLLCEENINDCKPEPCHHGVCKDGIATFSCE
CQPGYTGLICSTQVLECHSNPCQNRGRCIDLVNAYQCNCLPGTSGVNCEFNEDDCAGNPC
KYGECQDGINEYKCVCSPGYTGTKCEVEINECLSNPCMSGGTCMDNINGFQCLCPPSTHG
PLCLSGTDHCAHSPCVHGDCIEQQHGYRCECQAGWIGQHCDQEKDECQPSPCQNGGTCED
RHNGYTCQCQPGFRGVNCERNIDECVSGPCLNHGICIDGVNSYTCQCSPPFSGKHCEEEL
VPCASHPCERGGVCRPTADYTSYTCRCPAGWQGPRCTEDVNECKKNPCKNGGHCMNSPGS
YRCKCQPGYSGHNCQTDIDDCSPNPCLNGGSCVDDVGSYTCDCRPGFEGDRCEAEVDECA
SQPCQNGAVCRDYVNSFVCECRPGFDGILCEHNILECTESSCLNNGTCIDDINTFSCRCH
PGFYGAFCEFEKNECDSQPCKNGGTCTDGLGTYRCTCPVRYNGQNCQKLVNLCSKVHCHS
GSCSQTGTSWTCHCNMGWTGLYCDVPNMSCQNYAARKGVEVDSLCQNAGRCVNVANSHKC
QCQPGYMGSYCEEMVDECQSNPCRNGATCKDYQGTYECLCKPGFQGVNCEYDVDECHSKP
CLHGGTCINLINHFKCSCPPGTHGLQCEVNVDDCAPKPGSWEPRCLNGGQCVDGVGRYTC
SCPPGFVGEHCEGDLNECLSGPCHTPGSLDCVQLVNDYQCRCRLGYTGRHCESMVDLCLS
KPCHHGGVCSMNTSSVHGYTCSCVPGFTGFNCGEIEGYNCAKLHCQNGGRCVESSAGMYC
QCQSGFNGPHCENDQRCLTPCQNGGTCIKDPSNPFQYTCRCPTYFSGRYCENKLQSCPYP
QCVHHAGDKVCDDQCNNHECQWDGGDCSLNWEKPWVNCTASVPCWDLFKNKRCDKECDNP
GCLFDSFECQDTAPALCKYDKYCADHYSNGVCDQSCHTEACGWDGLDCSSDTAPKVIDGT
LVIVVRLQPKELIGDLKGFLRSLGALLHTNVRVKLNEKKEPMVYPYFAEAEQGRHIQRSR
SKRELDKEVIGSVVHLEIDNRECSQSSNYCFSNTNEAASFIAAAHIKADLPYPLVSVKSD
PTIPPEPLQPVFYLIAVAVVVILLILVLGMLAAKRKHKHGVLWLPDGFLANKNDKRREPV
GQDDFDMKNFKTQDGSMIDGSQRWLEDEVPSKKPRTEDKPLLPIAMDGGVDRREWTVQHR
KAADITLTPPQADLDTDCLDVNVKGPDGFTPLMLASLRNGGGPDCSIHGEEEEESGGDEP
GPSVISDLIAQGASLMAQTDRTGETALHLAARYARADAAKRLLDAGADPNAHDNMGRTPL
HAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEELIHCHADINAVD
DHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLDHYS
NRDITDHLDRLPRDTAHERMHHDIVRLLDQYNLVHSPHNGANPMGGGGNSVMCGANGAGF
IGMRPGPQGKKSRRGGGGAKVGGVGGGAKELKDMKAKRRKKPAGGEGPGVDGGVGGGSGG
GTGGGSANGIKAAGGPPESSVTMSPVDSLESPHSYTGDVSGAVSTTANSPPLLSSPTSRP
MLPPVSHMLGQQQGWVGMSKHSYSGHMFGLVPHPIPHTSIGQHHSQGPMLTPMNVTMSRE
QLPPIVTFQMMAPGGGQAMLKQSQPRQVQVTQSQGQNQNQARSQQGPGHHHCTQGMMYQM
PDQMGMGHGLSHTLQHPHNVSHGGIDSQSRPLPSYPPMQSPVDKYPTPPSQHSYTTAGSE
GTTPGHSAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPTMHCRRHTT
HTFQSRCSCSRSRNRCSRPLNSLSSETCRCLRRPACGKHKQTDFGVLCSKTLTHRNSSAF
LTSLLIFFVLHLSSHTSPFYVFFSSLHLYSF
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atggagccgatacccggtttatcctcgggcaaatcactagtcttcgtcttctgcttcatt
cagctttctctggctctgcagtgtgtggacaataaggcgccttgtgttaacaatgctacg
tgtctgaccttcagcaatggcactggatactgcaggtgtgctccaggcttcctgggtgaa
tactgccaccataaggacccatgtcatcctggatactgcctgaatggggggaactgctct
gtgtctatgtcagctggtgtacctgtaccaggcagcgccagctgcacctgccctcttggt
tacactggaccgcactgccaaactccacagaactccacgtgctaccccaacaacccctgt
gccaaccgaggtgtctgcaccctgctgcccctcgacaaatacacgtgcgagtgtgccaga
ggatggacaggactgcggtgtgagcatgaggacagctgtctctctagtccctgtgccaat
ggtggcaaatgcagctctttgtcaggcagcagctacacatgttcctgtcctcctggctac
acaggtcttcgctgcctcaatgacacagatgaatgtgcagccacaccctctgtatgccag
aatgaaggaatgtgtgtcaacacccctggctcctacaagtgtatttgtgccccggggttt
acgggccgacactgtgaaagctcatacatcccttgctcaccttcaccatgtctaaatgga
ggcacctgccaccagaattctgaaaccagctactcctgccactgtcttccaggattcaat
gggacaaactgtgagaataacattgatgactgcccaggtcatcagtgtgccaatgaagga
acttgtatggatggagtcaacacctacaactgtcaatgtcccccagagtggactggtcag
cactgtacagaggatgtggatgagtgtcgtctgcagccgaacacatgccagaatggaggg
acctgcagcaaccttttcggtggctacgtctgtgtgtgcgtcaatggatggagtggaccg
gactgttctgaaaacattgatgactgtgcgacagcttcctgcggccccggctccacatgc
attgaccgagttgcctcttttctctgtctctgcccccatggaaagacaggtttactttgc
catagagatgatgcctgtatcagcaacccgtgtagagagggctctcagtgcgacaccaac
cccatcagtggcatgttcaactgtaactgtccacctggatatgtagggagcacctgcaac
atcgacagagacgaatgtagtatcggtaccaacccctgcgagcatggcggtctgtgcgtg
aacactgatggctccttcacctgcaactgtgttaggggttactctggaccacgctgtgaa
caagacatcaatgagtgtgcttcaaacccctgccagaatgatggaacatgtctggatcgc
attggggactacacgtgtatctgcatgcccggatttggggggactcattgcgagatagag
gtgaatgagtgtctcagctcaccttgtctgaaccagggtaaatgtctggaccaggtcagc
cgctttgtctgcgagtgcccagcaggcttcagtggtgaaatgtgtcagatagacattgat
gagtgttcgagcacaccttgtttaaatggggccaagtgtatcgaccgacccaacggatat
gactgtgaatgtgctgaaggctttactggtctactttgtgaagaaaatatcaatgactgc
aagcccgagccatgccaccatggtgtgtgtaaggatggcattgccaccttctcctgtgag
tgccagcctggatacactggcctgatctgtagtacccaggtccttgagtgccatagcaac
ccttgtcagaaccgaggacgctgcattgatctggttaatgcctaccagtgtaactgccta
ccaggaacttcaggggtgaactgtgagttcaatgaagatgactgtgctgggaacccctgc
aagtatggagagtgccaggatggcattaatgagtacaagtgtgtgtgttccccgggatac
acaggaactaaatgtgaagtggaaatcaatgagtgtctctcaaacccatgtatgagtggg
ggaacctgcatggacaacatcaacgggttccagtgcctgtgcccacccagcacccatggg
cctctgtgcctctctgggactgaccactgtgcacatagcccttgtgtgcatggagattgt
attgaacagcaacatgggtaccgttgtgagtgtcaagctggctggatagggcaacattgt
gatcaggaaaaggatgagtgccagcccagtccatgccagaatggtggcacctgtgaggac
cgacataatggctatacctgtcagtgccaacctggattcaggggtgtgaactgtgagagg
aacatagatgaatgtgtgtctggcccctgtctgaaccacggcatttgtattgatggagtc
aacagttacacttgtcagtgtagtccaccattctcaggtaaacactgtgaggaggagctg
gttccctgtgcttctcatccatgtgagagagggggagtgtgtcgtccaactgcagactac
acctcttatacctgtcgctgtcctgctgggtggcaaggtccacgctgcactgaagatgtg
aatgaatgcaaaaagaatccttgcaaaaatggtggtcattgcatgaacagcccaggcagc
tacaggtgtaaatgtcaacctggatacagcggccacaactgccagacagacattgacgac
tgctcacccaatccatgcttaaatggaggttcctgtgtggatgatgttgggagttacacc
tgtgactgccgccccggttttgaaggggatcgctgtgaggcagaggtagatgagtgcgcc
agccagccctgccagaacggggccgtctgcagggactacgtcaacagctttgtgtgcgag
tgccgaccaggctttgatggaatcctgtgtgaacacaacatcctagagtgcactgagagc
tcatgcctgaataatgggacttgcattgatgacatcaacaccttttcttgtcgttgccat
cctggtttttacggggcgttctgtgagtttgagaagaatgagtgtgactctcagccctgt
aagaatggaggcacctgcactgacggcctgggcacttaccggtgcacctgccctgtgaga
tacaatggacagaactgccagaagttggtgaatctgtgcagcaaggtgcactgtcactcc
ggctcctgctctcagacaggaacctcctggacatgtcactgtaatatgggatggacggga
ctttactgtgacgttcctaacatgtcctgccagaactatgctgccagaaagggtgtggaa
gtggacagtttgtgtcagaatgctgggcggtgtgtgaatgttgccaattcccacaagtgt
cagtgtcaaccaggatacatgggcagctactgtgaagagatggtcgatgagtgccagtca
aacccgtgtcgcaatggagctacatgcaaggactatcagggcacatacgagtgtttatgt
aagccaggcttccagggtgtgaactgtgagtatgatgttgatgaatgccactctaagccg
tgcctccatggaggaacctgtataaacctcatcaaccacttcaaatgctcctgcccacct
gggacacacgggcttcagtgtgaagtgaacgtggatgactgcgcccccaagcctggttct
tgggaacctcgctgtctaaatggaggacagtgtgtggatggcgtgggccgttacacgtgc
tcctgccctccaggatttgttggagaacactgtgagggggatctcaatgaatgcctgtct
gggccctgccacacccccggcagcctcgactgtgtgcaactggtcaatgattaccaatgt
cgctgtcgcctcggatacacgggtcgtcattgtgagtccatggtggatctgtgtctgtct
aagccgtgtcatcacggtggtgtctgctccatgaacacgagctcagtacacggctacacc
tgctcctgcgttcctggctttactgggttcaactgtggtgaaatagaaggctacaactgt
gctaagctacattgccagaatggcgggcgctgcgttgagtcatcagctggcatgtactgc
cagtgccagtcaggcttcaatgggccacactgtgaaaatgatcagaggtgtctgacaccg
tgccaaaacggaggaacctgcatcaaagacccatccaacccattccagtacacctgccgc
tgccccacgtacttctctggacgatactgtgagaacaaattacaatcctgcccctatccg
cagtgtgtgcatcacgcaggggataaggtgtgtgatgatcaatgtaacaaccacgaatgt
cagtgggatggaggagactgctcactcaactgggagaagccttgggttaactgcaccgcc
agcgttccctgctgggatctctttaaaaacaaacgttgtgataaagagtgtgacaaccct
ggttgcctctttgacagctttgagtgccaggacactgcacctgccctctgcaagtatgac
aagtattgtgcagaccactacagcaatggtgtgtgtgaccagagctgccacacggaggcc
tgtggctgggacggcctggactgttcaagtgacactgcgcccaaagtgatagacggcact
ctggtaatcgtggttcggctgcagcctaaggagctgattggtgacttgaaaggtttcttg
cgctccttgggagccctgttacacaccaatgtgcgggtgaagctgaatgaaaaaaaggag
cctatggtatacccatactttgcagaggcggagcagggacgacacatacagaggagcagg
agtaaacgggagctggacaaggaggttattgggtctgtggtgcacctggaaattgataac
cgcgaatgttcccagagctctaactactgcttctccaacactaatgaggctgcgtccttc
attgcagcagcacatatcaaggctgacctgccttaccctctagtgtctgttaagagtgac
ccgaccattccaccggagcctcttcaacctgtgttttacctgattgctgtggctgtagta
gtcatcctgctcattctggtgctggggatgctagcagccaagaggaagcataaacatggt
gtcctgtggctgcctgatggcttcttggccaataaaaatgacaagaggagggaacctgtt
ggacaagatgactttgacatgaagaatttcaagacacaggatggatccatgatcgatgga
tctcagaggtggctggaggacgaggttccatccaagaaaccaagaactgaagacaaaccc
ttactgcccattgctatggatggaggtgttgatcgaagggagtggaccgtgcagcatcgc
aaagctgctgacatcactctcactcccccgcaggccgacctggacactgattgtctggat
gttaatgtcaagggacctgatggcttcactccactgatgctggcttcgctgcgtaacggc
ggaggcccagactgtagcattcatggagaagaggaggaggagagtggaggagatgaaccg
ggacctagtgtcatctcagacctgatcgctcagggtgcctcactgatggcccagactgac
cgcacaggagaaacagcactacacctggctgcccgctatgccagggctgatgctgctaag
aggttgctggacgctggagctgatcccaacgctcatgacaacatgggcagaactcctttg
catgccgctgtggcagctgatgcacagggagtcttccagattttgatccgtaatcgtgcc
acagagctggatgcccgtatgaatgacggcaccaccccactgatcctggcagccaggctc
gctgtggagggcatggtggaagagctgatccactgtcatgctgacatcaatgctgtagac
gaccacggtaaatctgctcttcactgggcagcagcagtcaataatgtggaggccactctc
gtgcttctgaagaacggagccaatcgtgacatgcaagacaataaggaggagactccactg
tttcttgcagccagagagggcagttttgaggcagctcaggttctcctcgaccactattcc
aatcgtgacatcactgatcacctggatcggctgccgagagacaccgctcacgagcgtatg
catcatgacatagtccgcctgctggaccagtacaatttggttcacagtccgcacaatggg
gctaatcccatgggtggaggaggaaactctgtcatgtgtggggccaacggagcaggcttc
attggaatgcgtcccggaccacaggggaagaagagcaggagagggggagggggggcgaag
gtgggaggtgttggcggcggagcaaaggagctaaaagacatgaaggcgaaacgaagaaag
aagcccgctggaggagaggggccaggtgtggatggtggagtagggggaggaagtggagga
ggcacaggaggagggagcgcaaatggcatcaaggcagcaggaggacctccagagagctct
gtcaccatgtcacctgttgactcgctggaatcaccacactcatacacaggtgacgtgtct
ggagccgtctccaccacggcaaactcccctcccctcctgagcagccccacctccagacca
atgctgcctcccgtcagccacatgctgggacagcagcagggctgggtgggcatgagcaaa
cacagctacagcggccacatgttcggcctcgtcccgcacccgataccccacaccagcata
ggccagcaccacagccagggccccatgctgacccctatgaatgtcacaatgagcagggag
cagctgcctcccatcgtcacgttccagatgatggccccgggtggaggccaagctatgctg
aagcagtcgcagccaaggcaggtccaggtcacacagtcccagggacagaaccagaatcag
gctcgctcccagcaggggccaggccaccaccactgcacccagggtatgatgtaccagatg
cccgaccagatgggcatgggacacgggctctcccacaccctgcagcatccccacaacgtc
agccacggagggatcgatagccagtctcggccgctgccctcttatccgcccatgcagagc
cccgtggataaataccccacaccaccctcccagcacagctataccaccgccggctcagag
ggcaccacccccggccactctgctcacccacccagcgagcacccttatctcaccccctcg
cctgaatccccagacccctggtcgtcctcttctcctcactccaactcagactggtctgat
gtcaccaccagccccacccctctgggtaaccccaccatgcactgccgtcgtcacaccaca
cacacattccagagcaggtgcagctgcagccgcagtcgcaacagatgcagcaggcctctc
aacagcctcagctcggaaacatgcaggtgtttgcgtaggccggcctgtggaaagcataaa
cagactgactttggggttctgtgtagtaaaactctgacacatagaaactcaagtgctttt
ctcacttctctgttaatcttctttgttcttcatcttagtagtcacacctcgcctttttat
gttttcttttcctctttgcacttatatagtttctaa
DBGET
integrated database retrieval system
