Scomber japonicus (chub mackerel): 128362196
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Entry
128362196 CDS
T09718
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128362196 (hps3)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
128362196 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
128362196
NCBI-ProteinID:
XP_053178915
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Position
7:complement(28535687..28549816)
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AA seq
1078 aa
AA seq
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MVHVYNCHPFCSQQILQVEQEPRLVCCGGGVLFVVATGGCKVEAYNLEVEGCPLICRFAT
MGTVRSIQHSTIGDYLVTIEEKNSATYLRAYTNWRYQAEEKARVGVRLLGHLLRGASQRG
GVQMEIIEIPMSERPVAVACCPVTGDLLVGCHKTLVLFTLRRPNQQNLNQSQQNLQSLWT
NTQQSSSQSQGQTSSSNQNISFLDFERSVILHVPGMKPKQVALCGGYVAVQAELEVLVLK
LDASTEPKSQDESSEPHKSDYLEDQADFLLLPKHGELLGDRAKDCDIPVSIEKTGLEDRG
QYTLSYVLFRRFSPDYFQGCSVEETQLHSLQLHPLFTSNQSVSADEPACIFCFFSLPTAG
YLYSLKGGVELISAYQYPEKVLEAVLTDHLLHVITKSALQCFTVRCAAVAARIEDPYIDS
TMRACPPSSLEVCALRMQLFIGLRSVCVFGRHVVLLSAADAETPEETERNNQRRSHELKE
HTMLTGIFLAVGIDPATTPALESLLSRPFLSRKWTVSSPKETSTAGHGWNLYVVDTVSPI
TLYQEMVEYSQRYAETNPQAQSLRHLFSEAHLLVRASLLQPSEQQQNSEGVPAVSLQTDT
DGERQTAAQTDRQELEKALRENCAQLGDCFSRSSQKDCHLALPYYRMSGLSVTEVMVRNR
PLPSSPHTYGPGFLFYLKHYLLEESEQILSQEAADEVIDIFSQSEPSQLVSVCASPSMTN
VSPERTLQILRHLEDSAGVSVPLTITMATMLLRLDNLPQYAQLMERHTEMLLVYGFIEEP
RLLLHGGGGGQHTHVRTTALSQQLAKSQPGLLVAGMVALHENNKVQLEQADHIFKELGCE
NCLQVDFWEGMLMASSQEAVIQELLFRVSSVYIDRLIQTNSDTLTNPPHRHPTRRSLKSA
DDLINSCTHYGALYPWLTVLSPAHTTSSQHQEALHKLQSLLCGPSLSVGSVVPLLECLSD
ETLWGFSLHLLCTTRRGQYDSSIEKLLDRCPQAIIAYANHQLQDKYMVLWWQKLLPELCN
RTRAAADNSILLAALKETLVVVAMEMSPAEFLELIPDDGTASYFLPHLLTCSQRHLLA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtctacaactgccaccctttctgctcacagcagatactacaggtggagcag
gagcctcgactggtctgctgtggaggtggagtcctgtttgttgtggccactggaggatgc
aaggtggaggcttacaatctggaggtggagggctgtcctctcatatgtcgctttgccacc
atgggcactgtgaggagcattcagcacagcacaataggagactatttggtgaccattgag
gaaaagaacagcgccacttacttgagagcctacaccaactggcgctaccaggctgaggag
aaagcccgtgttggggtgcgcttgttgggtcacctgctgcgtggggcgtctcaacggggc
ggagtacagatggagatcattgagatccctatgtcagagcgccctgtcgccgtggcgtgt
tgcccggtaacaggtgaccttctggtcggctgccacaagacactggttctgtttactttg
aggagaccgaaccagcagaacctgaatcagagtcagcagaatcttcagagcttgtggaca
aacactcagcagagctccagtcagagtcaaggtcagacctcaagttcaaaccagaatatt
tcctttttggactttgagcgctccgtcatcttgcatgtgccaggaatgaaacctaaacag
gttgcactgtgtggaggatacgtggcggtgcaggcagagctggaggtgctggtgctgaaa
ctggatgcatcgactgaacctaaaagccaggatgaatcatcagagccacataaaagtgat
tatctagaagaccaggctgactttctgctccttccaaaacatggagagttgctcggtgac
agagctaaagactgcgacatccctgtcagcatagaaaagaccgggctggaggacagagga
caatacaccctgtcctatgtgctcttcaggcgttttagtccagactacttccagggctgc
agtgtggaagagacacaacttcactctctacagctccacccactgttcaccagtaaccag
tcagtgtctgctgatgaaccagcatgcatcttctgcttcttctctcttcccaccgccgga
tacctatacagtctgaagggtggagtcgagcttatctcagcctatcagtatccagagaag
gtcctggaggcggtgctaacagaccatctgctacacgtcataaccaagagtgctttgcag
tgctttacggtgcgctgtgctgcagtagctgccaggattgaagacccttacatcgattcc
accatgagggcctgtccgccctccagcctcgaggtgtgtgcgctcaggatgcagctgttc
attggcttgcgctcagtgtgtgtcttcggccgtcatgtggtgctactctccgctgcagat
gcagagacaccagaggagaccgaacgcaacaatcagcgcaggagccacgagttgaaagag
cacaccatgctgactggtattttcctggcggtaggaatcgatcccgctaccacgccggct
ctggagagccttctatcacgccccttcctgagcaggaagtggacagtctcatctcccaaa
gagaccagcacggccggacatggatggaacctctatgtggtcgacaccgtctcccccatc
actctctaccaagagatggttgaatacagccaacgttacgcagagaccaacccacaggcc
caaagtctgcggcacctcttcagtgaagctcacctcctcgtccgcgcctccttactgcag
ccatcagaacagcaacagaacagcgagggcgtcccagcggtgtctctgcagacagataca
gacggagagagacagacagctgcacagacagacagacaagaactggagaaggcattaagg
gagaactgtgctcagctgggagactgtttcagcaggagcagccagaaggactgtcacttg
gctctaccttactacaggatgtctggtctgtcagtcacagaggtcatggtcaggaaccgc
ccccttcccagcagcccacacacctacggccccggcttcctattttacctgaagcattac
ctgttagaagaatcagagcagatcctcagtcaggaagcagctgatgaggtcatagacatt
ttcagccaatcagagccctcacagctcgtcagcgtgtgcgccagcccatccatgacgaac
gtcagtcccgaacggacgctgcaaatcttgcgacatctggaggacagcgctggcgtgtcg
gtgccactgacgatcaccatggcaaccatgctgctacgcttggacaacctgccacagtac
gcgcagctgatggagagacacactgagatgctgctggtttacgggttcatcgaggagccg
aggctgttgctgcacggtggaggtggaggccagcacacacatgtgcggaccacagcgctg
agtcagcagctggcaaaatcccagccaggactgctggtggccggcatggtggcgctgcat
gagaacaacaaagttcagctggagcaggccgaccatatattcaaggagctgggctgtgag
aattgcttacaggtggatttctgggaggggatgctcatggcctcgtcacaggaagctgtc
atccaggagcttcttttccgagtgtcttctgtctacatcgaccgactgatacagacaaac
tcagatacactcaccaaccctccacacagacatccaacacgaaggtcactgaagagcgct
gacgatctgatcaactcttgcacgcattacggtgctctgtacccgtggctcactgttctc
agtccagctcacactaccagctctcaacaccaggaggcgttacacaaactgcagtctctg
ctgtgtggtccgtccctgtctgtgggctctgtcgtgcctctgttggagtgtctctcagac
gaaaccttatggggcttcagcctgcaccttctctgcaccaccagaagggggcagtatgat
agcagtattgaaaagctgctggaccgttgccctcaggccatcatagcttacgccaatcac
cagttacaagacaaatacatggtgttatggtggcagaagctgctcccagagctttgtaac
cggacaagagctgctgcagacaacagcatcctactggctgctcttaaagagacactggtc
gtggttgccatggagatgagccctgctgagttcctggagctgatacctgacgatggcacc
gcctcatacttcttgcctcacttgttgacatgtagccagagacacctgcttgcatga
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integrated database retrieval system
