Scomber japonicus (chub mackerel): 128362210
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Entry
128362210 CDS
T09718
Symbol
slc44a5b
Name
(RefSeq) LOW QUALITY PROTEIN: choline transporter-like protein 5-B
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128362210 (slc44a5b)
04147 Exosome [BR:
sjo04147
]
128362210 (slc44a5b)
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
128362210 (slc44a5b)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
128362210 (slc44a5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
128362210
NCBI-ProteinID:
XP_053178928
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Position
7:complement(14323744..14357185)
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AA seq
752 aa
AA seq
DB search
MARKTDIPSSYYGEPRQFDPSFKGPVHKRSCTDVVCCIIFIAVILGYIALGTVAWIHGDP
RKVVYPTNSHGQFCGQQGTLNANKTKLFYFNMLKCANPAVLINLQCPTTQLCVSKCPDRF
ATLLDAQNTKTWEYYKQFCKPGFEIGSKTVGEVLRDEDCPSMIVPSRPFLQRCFPDFITR
NGILTVANQTKFNDGVNSQRSVNDLKEAANQVTAMQQGVDRGVASLLNAKEIGMKIFEDY
ANSWDWILIALVITMVVSLFFILLLRYTAGMLLWLIVFGVIAAVGYGIWHCYWEYSILSG
RSGSNVTISDIGFQTDFSIYLQLSQTWFIFMIVLSVIEFIIVVILIFLRTRLRIAIALLK
EGSRAISYIMSALFYPIITFFLLAICIAYWAVTAVFLASSGNAVYKVMAADDKCMYANLT
CSPKNFSQSNITKVCPGSQCMFAFYGGESVYHRYILVLHLCNLFVFLWLVNFTIALGQCT
LAGAFASYYWALKKPHDIPFCPLYAAFSRAIRYHTGSLAFGSLILTVVQMVRLVLEYLDQ
KLKGPQNACTRFILCCLKCCFWCLEHFIKFINRNAYIMIAIYGKSFCTSSKDAFFLLMRN
VIRVAVLDQVTDFLLFLGKLVISGGVGVLAFFFFTRKIPVIQEEVPSLNYYWVPLVTVIF
GSYMIAHGFFNVYSMCVDTLFLCFLWDLEANDGSAQRPYHMNSSLRNILKKKNVVHVRKR
SKETKRGGGRRKAKRSFTKVWYKYVWLLPNVI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaagacggacatcccctcctcttactatggtgagccacgccagtttgaccca
agcttcaaagggcctgttcataaaaggagctgcaccgatgtggtttgctgtattattttc
attgctgtcatcctcggctacatcgccctgggtactgtggcctggatccacggcgacccc
aggaaggtcgtctatccaaccaacagccatggtcagttctgtggccagcaggggacccta
aatgcaaacaaaaccaaattgttctacttcaacatgttgaaatgtgccaatcccgcagtt
ttaattaacctccagtgccctacaacccagctctgtgtctccaagtgccctgacagattt
gccactctcctggatgcgcagaataccaaaacctgggaatattacaagcaattctgcaaa
ccgggctttgagattggcagtaagacagtcggagaagtcttgcgagatgaagactgccca
tctatgattgtgccaagcagaccttttcttcagcggtgcttccctgatttcattacaaga
aatggaattttgactgtagccaatcagaccaagttcaatgatggtgtcaatagccagaga
agtgtcaacgacctcaaagaagctgccaaccaagtaaccgccatgcagcaaggagtggac
agaggtgtcgcaagtctgctgaatgccaaagaaattggcatgaagatctttgaggattat
gcaaattcctgggactggatcctcattgctctggtgattaccatggtggtcagcctgttc
ttcatcctactgctgcgttacaccgctggtatgcttctgtggctcattgtctttggtgtc
attgctgcagtcggctatggtatctggcactgctactgggagtatagtattctgagtggg
aggtcaggttctaatgtcaccatctctgatatcggcttccagacagacttcagcatttat
ctccagctcagccagacatggttcatcttcatgatcgtactttctgtgattgagttcatc
attgtggtcatactgatatttctgaggacgaggctgcgcatcgcaattgcattactgaag
gagggaagcagggccatcagttacatcatgtctgctcttttctaccctatcatcaccttt
ttccttctggccatctgcatcgcttactgggctgtcacagcagtcttcttagcatcatct
ggtaatgcagtctacaaggtcatggctgctgatgataaatgcatgtatgccaacctcaca
tgcagcccaaagaatttcagtcagagcaatatcaccaaagtgtgccccggatcacaatgc
atgtttgccttctatggtggggagagcgtgtaccaccgctacatcttagtccttcacctt
tgcaacctatttgtgttcctctggctggtcaactttacaatcgccctgggccagtgcacc
ctggccggggcctttgcatcctactactgggccctgaagaagccacatgacatccctttc
tgccctctctacgctgcatttagtagagccatacgttatcacacaggttccctcgccttc
ggttctctgatcctcactgtggtgcagatggtccgtcttgttctcgagtacctggatcaa
aaactgaaaggtcctcaaaatgcatgcactcgattcattctttgctgcctcaaatgctgc
ttctggtgcctggaacatttcatcaagtttataaacagaaatgcgtacattatgatagca
atatatggaaagagcttctgcacctcttccaaggatgctttcttcctcttgatgaggaat
gttattcgggtggctgtcctagaccaggtgacagactttctgcttttcttgggaaaactg
gttatttcaggaggtgttggtgttcttgcatttttcttcttcacacgtaaaataccagtc
attcaagaggaggtgccctccctaaattactactgggtcccccttgtgacggtgatattt
ggatcctacatgattgcacatggcttttttaacgtctactccatgtgtgtggacacactg
ttcctgtgctttttgtgggatctggaggcaaacgacggctcagcccaacggccctaccac
atgaattcaagcttgcggaatatcctcaaaaagaagaatgtcgtccacgtgagaaaaaga
agtaaagaaacgaagagaggtggtggaaggagaaaggctaaaaggtcatttaccaaagta
tggtacaagtatgtgtggcttttgccaaatgtaatttag
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